Gene Cpin_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0438 
Symbol 
ID8356544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp521362 
End bp522279 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID644962584 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003120137 
Protein GI256419484 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATGG CCGCGAATAA TAAAACCATT TTTACAGCGC TGGCAGCCAA TCTGCTGATT 
GCTGTCATCA AGTTTATTTC CGGTGCGGCA ACCAGTAGTT CCGCCATGAT ATCAGAAGGG
GTGCATTCCC TGGTGGATAC GACCAATCAG TTATTATTAC TGTTTGGCAT CAGGCGTAGT
AAACGCTCTC CTGATGAAAG ACGGCCTTTT GGTTATGGCA AGGAGATCTA TTTCTGGTCG
TTTATTGTAT CTATACTCAT CTTTGGTATA GGAGGCTGTA TTTCCTTTTA TCAGGGTGTG
ATTCATATTC AGCACCCTCC TCCCCTTGAA GATCCTACCT GGAATTATAT CGTACTGGCG
TTTTCATTTG TATTTGAAGG AACTTCCCTG GTTGTTGCTA TCAGGGCATT TGATAAGGTA
CGGGGTAATT TATCCTGGTG GACGGCGATC CACCGTAGTA AAGACCCGGC AAGTTTTATT
GTGTTGTTTG AAGATGGCGC TGCGGTGATC GGACTTTCAG TTGTTGCGTT AATGGTATAT
CTGGGGCATC ATTACAACAA TCCGTTCCTG GATGGAGTTG CTTCCTTGAT TGTGGGCATC
ATTCTCAGTA TTGTGTCGGT ACTGCTGGCG AGAGAAAGTC GTAGTCTGCT GATGGGAGAA
GGTATTGCGC CTGCTACGCA GCAGCACATA AAGGGGCTGG TAGAGAGTGA TCCGGCAATA
GTGAAGGTAC AACATATCTT TTCTACCTAT CAATCGCCGG AGGACGTTAT GTTATTACTG
ATGGTGACTT TCAGAGACGA CCTGGGAACG GAAGATATCA ACGAAGCCAT CATACGTATC
AGGAAAGAAA TTATGGCGGC TTATCCGCCT ATACACTTCA TTATCGTACA GCCGGAGCCA
CAGCAGCAGG CTACTTGA
 
Protein sequence
MYMAANNKTI FTALAANLLI AVIKFISGAA TSSSAMISEG VHSLVDTTNQ LLLLFGIRRS 
KRSPDERRPF GYGKEIYFWS FIVSILIFGI GGCISFYQGV IHIQHPPPLE DPTWNYIVLA
FSFVFEGTSL VVAIRAFDKV RGNLSWWTAI HRSKDPASFI VLFEDGAAVI GLSVVALMVY
LGHHYNNPFL DGVASLIVGI ILSIVSVLLA RESRSLLMGE GIAPATQQHI KGLVESDPAI
VKVQHIFSTY QSPEDVMLLL MVTFRDDLGT EDINEAIIRI RKEIMAAYPP IHFIIVQPEP
QQQAT