Gene Cpin_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0430 
Symbol 
ID8356536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp514902 
End bp515912 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content48% 
IMG OID644962576 
Producthypothetical protein 
Protein accessionYP_003120129 
Protein GI256419476 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID[TIGR02226] N-terminal double-transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CGATCTGGAA AAATATTGAA TTCGCCCATC CCGCCTTCTT CGGATTGCTG 
GTGCTGATAC CGGTAATGAT CTACTGGTAT ATTGCCCGGC AGCAACGCAG ACAGGTTGCT
ATGGAGATGT CTTCCCTGCA GGGATTGAAA GGCTTACCGG TATCCTGGAA GGTGAGATTG
CGCCCCTTAT TGCTGGTATT GCGTTTAGTG GCTTTTGCAG CACTGGTGGT TGCACTGGCC
AGACCGCAGA CAAGTAATAC ATCTGAAAGC ATCGACAGTG AAGGTATTGA TATCGTGCTG
GCGATGGATA TATCAGGTAG TATGCTGGCG CAGGACTTGC AACCTGACAG ACTGGAAGCC
GCCAAAAGGG TAGCTATGAA CTTTGTAGAC AGCCGTATCA GCGACCGTAT CGGTCTGGTG
ATCTTTTCCG GCGAAAGCTT TACACAATGT CCTATTACGA CGGATCACGG TGTGCTGAAA
AATCAGATCG CACAGGTGAA AAGTGGTATG CTGCAGGATG GTACAGCGAT CGGTATGGGA
CTGGCTACAT CTGTAGAACG CTTACGTACC AGCAAGGCGA AAAGTAAAGT GATCATCCTC
CTGACGGATG GTGTGAACAA TACTGGTCTG ATAGATCCGC TTACCGCACT GGAGATTGCA
AAGGCATTTA AGATCCGCGT ATATACCATC GGTGTTGGTA CCATTGGTAA AGCGCCATTC
CCGATGACAA TGCCGGATGG CTCTATCCAG ATGCAGATGC AGGATGTACA GCTGGACGAA
CCTTTAATGA AAAAGATCTC TGTTGAAACA GGGGGTAAAT ATTTCAGAGC TACCAGCAAC
AAAGAACTGG AAAACATCTA CGGAGAGATC GACAAACTGG AGAAAACCAA GGTTGAGATT
ACCTCTTATA AACGTTTTGC AGAGCATTTC TTCGCACTGG CAATGCTGGC GCTGGCATGT
ATACTGCTGG AGGTGGTGTT GAGATATACG GTCTTCAGAA GTCTGCCGTA A
 
Protein sequence
MDFSIWKNIE FAHPAFFGLL VLIPVMIYWY IARQQRRQVA MEMSSLQGLK GLPVSWKVRL 
RPLLLVLRLV AFAALVVALA RPQTSNTSES IDSEGIDIVL AMDISGSMLA QDLQPDRLEA
AKRVAMNFVD SRISDRIGLV IFSGESFTQC PITTDHGVLK NQIAQVKSGM LQDGTAIGMG
LATSVERLRT SKAKSKVIIL LTDGVNNTGL IDPLTALEIA KAFKIRVYTI GVGTIGKAPF
PMTMPDGSIQ MQMQDVQLDE PLMKKISVET GGKYFRATSN KELENIYGEI DKLEKTKVEI
TSYKRFAEHF FALAMLALAC ILLEVVLRYT VFRSLP