| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0429 |
|---|
| Symbol | |
|---|
| ID | 8356535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 513705 |
|---|
| End bp | 514640 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962575 |
|---|
| Product | ribosome-associated GTPase |
|---|
| Protein accession | YP_003120128 |
|---|
| Protein GI | 256419475 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGGCAA CTATTTACAG ATCGACCGGT AGCTGGTATA CAGCAAAAAC AACCGAAGGG
GAAGTGTTCC AGGCACGTAT CAAAGGGGTA TTAAAAATCG ATGAAGATAT TACCTCCACC
AATCCTATTG CCGTAGGCGA TGTGGTAGAG ATCGTGCGGG AAGGCGGAGA TGCTACTGCG
AACAATGCAA TGATCACGGA GATTAGCAAA CGACATAATT ATATTGTGCG GAGTTCTCCG
CATAAGAAGA ACCAGAAACA CATCGTGGCG GCTAATATGG ACCAGGCGAT GCTGATCTGT
ACGGTAAAAG AGCCACGTAC CTCAAACGGC TTTATGGACA GGTTTCTCGT AACAGCGGCG
GCCTATCATA TTCCGGTGAT CCTGGTCTTT AATAAGAAGG ATATTTATAA AGAAAAAGAC
CTGGATAAGT TCGCCGAACT ACAGGCTTTA TATGAAGATA TCGGGTATAA GGTATTATTA
GTATCTGCAG AAACCACTGA TGGTATTGAT CTCCTGAAAG CGGAGATGAA AGATAAAACC
ACCCTGATGT CAGGCCATTC CGGTGTAGGT AAATCATCCC TGATCAACCG TTTGTTACCG
GGACTGGATC TCCGTACTAC AGCAGTGAGC GGATGGAGCG GAAAAGGTTT ACACACGACT
ACCTATGCAG AAATGTACGA CCTGCCGGAT GGCGGCAAAT TGATTGATAC ACCGGGTGTG
CGTGAGTTTG GTATTGTGGA TATCACAAAG CCGGAGTTAT CCCATTATTT CCTGGAAATG
CAGCCCTATC TACAGGAGTG TCAGTTCAAT AACTGTCTCC ATATCAATGA GCCCGGATGT
GCCGTAAAAG CGGCTGTAAA TGAAGGCGAA ATTGATGTTG AGCGTTATGT CAGCTATGCC
AGTATCCTGG AAAGTATACA GGAAGACCAA TACTGA
|
|---|
| Protein sequence | MQATIYRSTG SWYTAKTTEG EVFQARIKGV LKIDEDITST NPIAVGDVVE IVREGGDATA
NNAMITEISK RHNYIVRSSP HKKNQKHIVA ANMDQAMLIC TVKEPRTSNG FMDRFLVTAA
AYHIPVILVF NKKDIYKEKD LDKFAELQAL YEDIGYKVLL VSAETTDGID LLKAEMKDKT
TLMSGHSGVG KSSLINRLLP GLDLRTTAVS GWSGKGLHTT TYAEMYDLPD GGKLIDTPGV
REFGIVDITK PELSHYFLEM QPYLQECQFN NCLHINEPGC AVKAAVNEGE IDVERYVSYA
SILESIQEDQ Y
|
|---|
| |