| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0426 |
|---|
| Symbol | |
|---|
| ID | 8356532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 512696 |
|---|
| End bp | 513226 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962572 |
|---|
| Product | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein |
|---|
| Protein accession | YP_003120125 |
|---|
| Protein GI | 256419472 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCA TCTTACCGGT TAAAGGAACA CTGCCTACAA TGGGAAACGA CTGTTTTATT
GCGCCAAATG CGACTATCGT AGGCGATGTC GTTATGGGCG ATCAATGCAG CGTCTGGTTT
AATGCAGTGA TCCGCGGAGA TGTAAACAGC ATCAGGATGG GCAATAAAGT AAATGTGCAG
GATGGCGCCG TGATACATTG CACCTATGAA AAAACAAAAG CAATTATTGG CAATAATGTC
TCTATCGGAC ATAACGCTAT CGTGCATGGC TGCACTGTTG AAGATAATGT ATTGATCGGC
ATGGGCTCAA TTGTGATGGA TAATGCGCAC ATTGGCAGTA ATAGCATCAT TGCGGCAGGA
GCAGTAGTAC TGGAAGGTAC CCAAGTAGAG CCGGGATCCA TTTATGCCGG CGTACCTGCC
AAAAAAGTGA AAGATATCAG CCAATCCCTG ATCAGTGGTG AAATAGACCG CATTGCCAAC
AACTATCTCA TGTACTCCGG CTGGTTCAAA GAGGATGCCG GTAGTAAGTG A
|
|---|
| Protein sequence | MPVILPVKGT LPTMGNDCFI APNATIVGDV VMGDQCSVWF NAVIRGDVNS IRMGNKVNVQ
DGAVIHCTYE KTKAIIGNNV SIGHNAIVHG CTVEDNVLIG MGSIVMDNAH IGSNSIIAAG
AVVLEGTQVE PGSIYAGVPA KKVKDISQSL ISGEIDRIAN NYLMYSGWFK EDAGSK
|
|---|
| |