Gene Cpin_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0425 
Symbol 
ID8356531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp511449 
End bp512639 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content49% 
IMG OID644962571 
Productaminotransferase class-III 
Protein accessionYP_003120124 
Protein GI256419471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA GACAACTATT TTTACGCCAT GTGGCTCAGT TATCTGACGC CCCTATGGCT 
CTTGAGATAA CAAAGGCTTC CGGCATGTAT ATGTGGGATG CGGATGGCAA AAAGATCATG
GATCTGATCG CAGGTATCAG CGTGTGCAAC GTAGGGCACT CCCACCCTGC TGTCGTGAAT
GCCATAAAGG AACAGGCGGA ACAATATATG CACCTGCTGG TGTATGGAGA GCTGATTCAG
ACCCCGCAGG TTGGTTTTGC GACCCTGCTG ACCCAGCACC TGCCGGCATC GCTTAACAGT
GTTTATTTCA CGAATTCCGG TGCGGAGGCA GTAGAAGGCG CCATGAAACT GGCCAAACGT
TATACCGGCA GAACGGAAAT CCTGGCTTTT GACAGAAGCT ATCATGGTTC CACACAGGGG
GCTATGAGTA TCATGGGGGA TGAAACCTGG AGAAATGCCT ATCGTCCGTT ATTGCCTGAT
ATACAGCATC TTCAGTATAA TACATGGGAA GCGCTGGACA AGATCACCGA ACGTACGGCC
TGTATTATAC TGGAAACCGT ACAGGCGGAA GCCGGTGTCA AAGTCCCACA AAAAGAATGG
TTACAGGCCA TCCGGGAGAA ATGTACCGCT ACCGGTACCC TCATGGTGTT GGATGAGATA
CAGTGCGGAT TGGGAAGAAA TGGTAGTCTC TGGGCATTCG AACAGGCCGG CGTAGTACCG
GATATATTAT TGCTGGGAAA AGCACTGGGT GGTGGTATGC CAATGGGGGC ATTCATTGCC
GGCAGAGACA TTATGTGGAG TTTTACCAAT AAACCCGTGC TCGGACATAT GACCACCTTT
GGCGGTCATC CCGTGATTTG TGCGGCAGGT ATGGCAGGAT TTAAGGTCTT GCTCGAAGAG
AACCTGATAG ACCATGTTAA GGCGAAAGGA GCGCTGTTCC ACCAGTATCT CAAACATCCG
GCTATTAAGG ATATCCGTTC TCTTGGACTG ATGATGGCCG TTGAATTTGA GAGCTTTACC
ATGAATAAAA AGGTGATCGA TCTGTGTATA GAAAAAGGCT TGCTGACGGA CTGGTTCCTG
TTTGCGCCGG AGTGTCTGCG TATTGCGCCG CCATTGATAA TCAGTGAAGA AGAGATCAGA
CAGGCTTGTG ATATTATTCT ACAGGCGATA GAGGAAGCGA CAAAGAGATA A
 
Protein sequence
MNNRQLFLRH VAQLSDAPMA LEITKASGMY MWDADGKKIM DLIAGISVCN VGHSHPAVVN 
AIKEQAEQYM HLLVYGELIQ TPQVGFATLL TQHLPASLNS VYFTNSGAEA VEGAMKLAKR
YTGRTEILAF DRSYHGSTQG AMSIMGDETW RNAYRPLLPD IQHLQYNTWE ALDKITERTA
CIILETVQAE AGVKVPQKEW LQAIREKCTA TGTLMVLDEI QCGLGRNGSL WAFEQAGVVP
DILLLGKALG GGMPMGAFIA GRDIMWSFTN KPVLGHMTTF GGHPVICAAG MAGFKVLLEE
NLIDHVKAKG ALFHQYLKHP AIKDIRSLGL MMAVEFESFT MNKKVIDLCI EKGLLTDWFL
FAPECLRIAP PLIISEEEIR QACDIILQAI EEATKR