Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0425 |
Symbol | |
ID | 8356531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 511449 |
End bp | 512639 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962571 |
Product | aminotransferase class-III |
Protein accession | YP_003120124 |
Protein GI | 256419471 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA GACAACTATT TTTACGCCAT GTGGCTCAGT TATCTGACGC CCCTATGGCT CTTGAGATAA CAAAGGCTTC CGGCATGTAT ATGTGGGATG CGGATGGCAA AAAGATCATG GATCTGATCG CAGGTATCAG CGTGTGCAAC GTAGGGCACT CCCACCCTGC TGTCGTGAAT GCCATAAAGG AACAGGCGGA ACAATATATG CACCTGCTGG TGTATGGAGA GCTGATTCAG ACCCCGCAGG TTGGTTTTGC GACCCTGCTG ACCCAGCACC TGCCGGCATC GCTTAACAGT GTTTATTTCA CGAATTCCGG TGCGGAGGCA GTAGAAGGCG CCATGAAACT GGCCAAACGT TATACCGGCA GAACGGAAAT CCTGGCTTTT GACAGAAGCT ATCATGGTTC CACACAGGGG GCTATGAGTA TCATGGGGGA TGAAACCTGG AGAAATGCCT ATCGTCCGTT ATTGCCTGAT ATACAGCATC TTCAGTATAA TACATGGGAA GCGCTGGACA AGATCACCGA ACGTACGGCC TGTATTATAC TGGAAACCGT ACAGGCGGAA GCCGGTGTCA AAGTCCCACA AAAAGAATGG TTACAGGCCA TCCGGGAGAA ATGTACCGCT ACCGGTACCC TCATGGTGTT GGATGAGATA CAGTGCGGAT TGGGAAGAAA TGGTAGTCTC TGGGCATTCG AACAGGCCGG CGTAGTACCG GATATATTAT TGCTGGGAAA AGCACTGGGT GGTGGTATGC CAATGGGGGC ATTCATTGCC GGCAGAGACA TTATGTGGAG TTTTACCAAT AAACCCGTGC TCGGACATAT GACCACCTTT GGCGGTCATC CCGTGATTTG TGCGGCAGGT ATGGCAGGAT TTAAGGTCTT GCTCGAAGAG AACCTGATAG ACCATGTTAA GGCGAAAGGA GCGCTGTTCC ACCAGTATCT CAAACATCCG GCTATTAAGG ATATCCGTTC TCTTGGACTG ATGATGGCCG TTGAATTTGA GAGCTTTACC ATGAATAAAA AGGTGATCGA TCTGTGTATA GAAAAAGGCT TGCTGACGGA CTGGTTCCTG TTTGCGCCGG AGTGTCTGCG TATTGCGCCG CCATTGATAA TCAGTGAAGA AGAGATCAGA CAGGCTTGTG ATATTATTCT ACAGGCGATA GAGGAAGCGA CAAAGAGATA A
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Protein sequence | MNNRQLFLRH VAQLSDAPMA LEITKASGMY MWDADGKKIM DLIAGISVCN VGHSHPAVVN AIKEQAEQYM HLLVYGELIQ TPQVGFATLL TQHLPASLNS VYFTNSGAEA VEGAMKLAKR YTGRTEILAF DRSYHGSTQG AMSIMGDETW RNAYRPLLPD IQHLQYNTWE ALDKITERTA CIILETVQAE AGVKVPQKEW LQAIREKCTA TGTLMVLDEI QCGLGRNGSL WAFEQAGVVP DILLLGKALG GGMPMGAFIA GRDIMWSFTN KPVLGHMTTF GGHPVICAAG MAGFKVLLEE NLIDHVKAKG ALFHQYLKHP AIKDIRSLGL MMAVEFESFT MNKKVIDLCI EKGLLTDWFL FAPECLRIAP PLIISEEEIR QACDIILQAI EEATKR
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