Gene Cpin_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0416 
Symbol 
ID8356522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp501946 
End bp502344 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID644962562 
ProductClass I peptide chain release factor 
Protein accessionYP_003120115 
Protein GI256419462 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAG ATCTTTCCGC TGAAATCACC TTCCAAACAG CCAGAAGTGG GGGTAAAGGC 
GGACAAAATG TCAATAAAGT GGAGACGATG GTAGAAGGAT ATTTCGACGT CTCCGCGTCA
ACATTGTTAA CCCAGGAACA AAAAGCACTG GTACAGGAAA AACTGGGCCA CCGCATTAAT
GCGGAAGGGC TGTTACAAGT CCGCTCACAG GAAGAGCGTA CCCAGCTGGG TAACAAACAA
CTGGTTATAA AAAAGATGAA CGAACTGGTG AGTAAAGCAC TCATCAAACC CAAAAAGAGG
GTGCCTACGC GGCCATCCAG AGCTGTACGG GAAAAGAGAA TCCAACTTAA AAAACAGCAA
TCCGAGAAAA AACAGCAGCG CCGGAAAGGG CTGGAATAG
 
Protein sequence
MSLDLSAEIT FQTARSGGKG GQNVNKVETM VEGYFDVSAS TLLTQEQKAL VQEKLGHRIN 
AEGLLQVRSQ EERTQLGNKQ LVIKKMNELV SKALIKPKKR VPTRPSRAVR EKRIQLKKQQ
SEKKQQRRKG LE