| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0414 |
|---|
| Symbol | |
|---|
| ID | 8356520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 500005 |
|---|
| End bp | 500457 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962560 |
|---|
| Product | D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| Protein accession | YP_003120113 |
|---|
| Protein GI | 256419460 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
|---|
| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCAG TTATACAACG CGTGTCCCGG GCGTCCGTGA CCGTAGACGG GAATATTACA
GGTAGTATCG ATACCGGACT GCTGGTATTA TTGGGCATTG AAGATGCCGA TAATACAGAA
GATATTATCT GGTTGAGTAA TAAAATCGTG AACCTCCGTA TTTTTAACGA CGAAGAAGGT
GTAATGAACC GTTCGGTGAA AGAAGTGGAC GGTGATGTGC TGCTCGTCAG TCAGTTTACC
CTGCACGCTG CCACCAAAAA AGGAAACCGC CCCTCCTATA TCCGCGCCAG TAAACCGGAT
ATTGCCATAC CCCTGTATGA ACAGATGATC AGTCATTTAG GACAGGACAT GGGGAAAAAG
ATTCCTACCG GCATTTTTGG CGCAGATATG AAGGTGGACC TGTTGAATGA CGGCCCCGTT
ACTATCATTA TTGACACAAA AGCAAAAGAA TAA
|
|---|
| Protein sequence | MRAVIQRVSR ASVTVDGNIT GSIDTGLLVL LGIEDADNTE DIIWLSNKIV NLRIFNDEEG
VMNRSVKEVD GDVLLVSQFT LHAATKKGNR PSYIRASKPD IAIPLYEQMI SHLGQDMGKK
IPTGIFGADM KVDLLNDGPV TIIIDTKAKE
|
|---|
| |