Gene Cpin_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0412 
Symbol 
ID8356518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp498690 
End bp499643 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content47% 
IMG OID644962558 
Productribonuclease BN 
Protein accessionYP_003120111 
Protein GI256419458 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC CCTCTATAGT AAAAACTTAC TGGCAGATCC TGAGGCAGAC TGTCAATGAC 
TTTATGGATG ATAAGGTGCT CAAGCTCAGT GCGGCATTAT CCTATTACAC TATCTTTTCC
ATTGCACCCA TGCTGATTGT GATCATCACC TTGTGCGATG TGTTCCTGGG AAAAGAAGCC
ATTGAGGGTA GTGTATATGG GCAGATCAAT GATATGGTCG GTAATGAGGC GGCTTTGCAG
ATCCAGCAGA TGATCAAAAA TGCAGCCCTT TCCGGAGATT CTACCGTGGC TACCGTAATC
GGGATAGTGA CCCTGATCAT CGGTGCCACC AGTGTATTTG GTGAAATCCA GGACTCTATT
AACTTTATCT GGCAGCTGAA GGCCAAACCT AAAAATGGTC TGCTGAAAAT GCTGCTCAAC
CGATTATTAT CTTTCTCCAT GGTGGTCAGC CTCGGATTTA TTCTGATGGT TTCCCTGGCT
ATGAACGGTA TCATAGAACT GTTCAGTCAA CAACTGGCAG TCCTGTTCCC ACAGGTAACC
ATGGTATTGG TATATATCGT CAACCTGGCC CTGACCTTCC TGATCATCAG TTTCCTCTTT
GCCATTATCT TCAAAGTGTT GCCAGACGCC AAAGTGAGGT GGAAACATGT GATCGTGGGA
GCTGTCACTA CGGCCATCCT GTTCATGATC GGGAAATTCG CCATCGGCAT GTACCTGGGA
TCCAGTAAGG TAGGGACTGC CTATGGGGCC GCAGGGTCTA TTGTCATTAT CCTGCTCTGG
GTGTATTATT CGGCGATAAT CCTGTATTTT GGGGCCGAAT TTACCCAGGT GTATGTGCAG
CATTTCGGCG GAAAGATCAG ACCCAATGAA TATGCAGTGT ATGTGAAGGA AGTGCCGGTA
GAAACGGATG AATTGCCGGT AACAGCCCCT GTAACCAATG AAAAAGGTAA ATAA
 
Protein sequence
MKIPSIVKTY WQILRQTVND FMDDKVLKLS AALSYYTIFS IAPMLIVIIT LCDVFLGKEA 
IEGSVYGQIN DMVGNEAALQ IQQMIKNAAL SGDSTVATVI GIVTLIIGAT SVFGEIQDSI
NFIWQLKAKP KNGLLKMLLN RLLSFSMVVS LGFILMVSLA MNGIIELFSQ QLAVLFPQVT
MVLVYIVNLA LTFLIISFLF AIIFKVLPDA KVRWKHVIVG AVTTAILFMI GKFAIGMYLG
SSKVGTAYGA AGSIVIILLW VYYSAIILYF GAEFTQVYVQ HFGGKIRPNE YAVYVKEVPV
ETDELPVTAP VTNEKGK