Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0412 |
Symbol | |
ID | 8356518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 498690 |
End bp | 499643 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962558 |
Product | ribonuclease BN |
Protein accession | YP_003120111 |
Protein GI | 256419458 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC CCTCTATAGT AAAAACTTAC TGGCAGATCC TGAGGCAGAC TGTCAATGAC TTTATGGATG ATAAGGTGCT CAAGCTCAGT GCGGCATTAT CCTATTACAC TATCTTTTCC ATTGCACCCA TGCTGATTGT GATCATCACC TTGTGCGATG TGTTCCTGGG AAAAGAAGCC ATTGAGGGTA GTGTATATGG GCAGATCAAT GATATGGTCG GTAATGAGGC GGCTTTGCAG ATCCAGCAGA TGATCAAAAA TGCAGCCCTT TCCGGAGATT CTACCGTGGC TACCGTAATC GGGATAGTGA CCCTGATCAT CGGTGCCACC AGTGTATTTG GTGAAATCCA GGACTCTATT AACTTTATCT GGCAGCTGAA GGCCAAACCT AAAAATGGTC TGCTGAAAAT GCTGCTCAAC CGATTATTAT CTTTCTCCAT GGTGGTCAGC CTCGGATTTA TTCTGATGGT TTCCCTGGCT ATGAACGGTA TCATAGAACT GTTCAGTCAA CAACTGGCAG TCCTGTTCCC ACAGGTAACC ATGGTATTGG TATATATCGT CAACCTGGCC CTGACCTTCC TGATCATCAG TTTCCTCTTT GCCATTATCT TCAAAGTGTT GCCAGACGCC AAAGTGAGGT GGAAACATGT GATCGTGGGA GCTGTCACTA CGGCCATCCT GTTCATGATC GGGAAATTCG CCATCGGCAT GTACCTGGGA TCCAGTAAGG TAGGGACTGC CTATGGGGCC GCAGGGTCTA TTGTCATTAT CCTGCTCTGG GTGTATTATT CGGCGATAAT CCTGTATTTT GGGGCCGAAT TTACCCAGGT GTATGTGCAG CATTTCGGCG GAAAGATCAG ACCCAATGAA TATGCAGTGT ATGTGAAGGA AGTGCCGGTA GAAACGGATG AATTGCCGGT AACAGCCCCT GTAACCAATG AAAAAGGTAA ATAA
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Protein sequence | MKIPSIVKTY WQILRQTVND FMDDKVLKLS AALSYYTIFS IAPMLIVIIT LCDVFLGKEA IEGSVYGQIN DMVGNEAALQ IQQMIKNAAL SGDSTVATVI GIVTLIIGAT SVFGEIQDSI NFIWQLKAKP KNGLLKMLLN RLLSFSMVVS LGFILMVSLA MNGIIELFSQ QLAVLFPQVT MVLVYIVNLA LTFLIISFLF AIIFKVLPDA KVRWKHVIVG AVTTAILFMI GKFAIGMYLG SSKVGTAYGA AGSIVIILLW VYYSAIILYF GAEFTQVYVQ HFGGKIRPNE YAVYVKEVPV ETDELPVTAP VTNEKGK
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