Gene Cpin_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0410 
Symbol 
ID8356516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp496429 
End bp497148 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID644962556 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003120109 
Protein GI256419456 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC AATGGCATAA GGGACTGGTG ACCCGTATCG TACAGGAAAC CCATAATACA 
CGCAGGTTCT GGATACAGAT CCCCGAGCTG GAGCAGTTCA GCTTTAAAGC CGGGCAGTTT
GTCACCCTCG ATCTTCCCAT ACACGAACAA AAAAACAAAC GCTGGCGCAG CTACTCCATT
GCCTCCCCGC CGGATGGTAC CAATACCATT GAACTGGTGA TTGTATTACT GGAAGGAGGG
GCAGGTACCA ACTATCTCTT TAACCACGTT AAAGAAGGGA GCGAACTGGT ATTAAAAGGC
CCGTTAGGTC ACTTTGTATT ACCCGAACAA CTGGACAAAG ACCTTTTCTT TATCTGTACA
GGCACTGGTA TTGCTCCTTT CAGGGCCATG GCGCAATATA TAAAGGCGCA CGATCTGGCA
CATCCGCCTA TACATCTTAT ATATGGGTGC CGACAGCAAT GCGATCTGCT GTATGCGGCG
GAGATGTGGG ACCTGGAAAA AGAATTGACA GACTTTCATT ATACGCCTAC ACTATCCAGG
GATGATGACA AATGGAGCGG CAGAAAAGGG TATGTGCATC TTATTTATGA GGAACTGGCA
CAACGTCAGC CGGCACATTT CTTCTTATGC GGCTGGAAAA ATATGATCGA CGAGGCCAAA
CACCGTATCC TGGCACTGGG TTATGACAAA CATGATATTC ACCAGGAGTT ATATGGTTAA
 
Protein sequence
MADQWHKGLV TRIVQETHNT RRFWIQIPEL EQFSFKAGQF VTLDLPIHEQ KNKRWRSYSI 
ASPPDGTNTI ELVIVLLEGG AGTNYLFNHV KEGSELVLKG PLGHFVLPEQ LDKDLFFICT
GTGIAPFRAM AQYIKAHDLA HPPIHLIYGC RQQCDLLYAA EMWDLEKELT DFHYTPTLSR
DDDKWSGRKG YVHLIYEELA QRQPAHFFLC GWKNMIDEAK HRILALGYDK HDIHQELYG