| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0398 |
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| Symbol | |
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| ID | 8356504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 474430 |
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| End bp | 477981 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962544 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_003120097 |
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| Protein GI | 256419444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.540966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA AATATCAGGA ATATAATCAG CTGAATTTAC CGCAGATAGA GAAGGATATA
TTGGCGCACT GGGAAGAAAT CCAGGCATTC GAGAAAAGCG TATCCATTCG CGAAGGCGCC
ACTCCTTTCG TATTTTATGA AGGTCCGCCT AGTGCGAACG GTATGCCTGG TATTCACCAC
GTGATTTCCC GTACCCTGAA AGATCTGGTT TGCCGTTACA AAACAATGAA CGGTTTCCAG
GTGAAACGTA AAGGTGGCTG GGATACCCAC GGTTTACCTG TGGAACTGGG TGTAGAAAAA
ATGCTCGGTA TTACCAAGGA AGCTATCGGT AAAACAATTT CCATTGAGGA CTATAATAAG
GCCTGCCGCG CAGAAGTATT AAAATTCAAA GATAAATGGG ATGACCTGAC CCGTCAGATG
GGATATTGGG TTGACCTGAA ATCTCCGTAC ATCACTTTCG ACAATAATTA TATTGAGAGT
CTGTGGTGGT GTCTGAGCGA ACTGTATAAA AAAAATCTGT TATATAAGAG CGTTAGTATC
CAGCCGTATT CTCCGGCTGC AGGTACTGGG CTGAGTTCCC ATGAGCTGAA TATGCCGGGT
TGCTACAAAG AGGTAAAAGA CACTACTGTC GTAGCGATGT TTAAAGCGAT CGAAGCTGAC
AACTCCGCAT TTCTGTTTGA AGCAGCAAGA AAAATTGCTG CTGATGCAGA AGTATTCTTC
ATGGCCTGGA CCACTACTCC ATGGACGCTC CCATCCAACC TGGGTCTGAC CGTAGGTGCT
AACATCGAGT ACACCCTTGT ACGCACGTTT AACCCATATA CCCATCTGCC GCAGTTTGTG
GTAATGGCGA AAGACCTGCT GGGTAAGTAT TTCAAACAGG AAGGTGAAGA CGGCGATTTT
GCTGCCTATA AAGAAGGAGA TAAAATCATT CCCTGGCAGA TTTTGTCTGT ATTCAAAGGA
AGTCAGCTGG AAAACATCCG TTATGAGCAG CTGCTGCCTT ACGTACAGCC AGAATCCGGC
GATCCGTTCC GTGTACTGTT AGGCGATTTC GTAACAACAG AAGATGGTAC AGGTATCGTG
CATACTGCTC CTGCTTTTGG TGCGGATGAC TATCGCGTAG GACAGAAATA TGACATCGGT
ATACTGACCC TGGTAGATCG TCAGGGTAAG TTCCTGGATG AAGTAGGTGA GTTTGGTGGT
CGTTATGTAA AGAATTATAA GAACGATCCG GAGTATAAAG ACGTAGATGT TGATATCTCT
GTAAAGCTGA AGAGAGAAAA CCGTGCTTTC AAAGTAGAGA AATACGAACA TACTTACCCT
CACTGCTGGC GTACACATAA ACCAGTACTG TATTATCCTT TGGATGCGTG GTTTATCAGA
ACTACTGCGG CTAAGGAGAA GATGGTAGAA CTGAACAAGA CGATCAACTG GAAACCAGCC
AGTACCGGTA CAGGCCGTTT TGGCAACTGG CTGGAGAACA TGGTTGACTG GAACCTGAGC
CGTAGCCGTT TCTGGGGTAC GCCGCTGCCG GTATGGAGAA CAGTTGCTGT GAAAGAGGAT
AGTCCGGAAG GCGCTGTACA GAAATGTCTG GGTGCAAAGA ACGAACTGGT GGGTGCGCTG
CTGTTTGTGA AGAAAGATGA ATTCAAGGCG GATGTATTAA ATGCAGACAG TGCGCTGAGC
AAACGTATCG CGGCTCATAA TGCACAGTAC GTTGGAAAGA GTAAGGAAGA ACAGGAGCAG
TTTGTTATTA ATATAGATAA GATTCGCGCG AAAATTCAGA AAGAAGAGAT CACCTTGGTA
GATGTGGCTT TGGCTAACTT CTACCTGACA GATCTGGTGA GTAGCTATTG CGTAGCGATT
ACCGAAGAAA CATTAGCAGA TATCGACCTG CATAAACCAA TGGTGGACAA TCTGATCTTC
GATCATGAAG GGCAGCTGAT GTATCGTGAG CCAGATCTGG TGGATGTTTG GTTTGATAGT
GGAGCGATGC CTTATGCCCA GTGGCACTAT CCGTTTGACA ACAAAGAAGA ATTTGCGAAG
AGTTTCCCGG CCGATTTCAT TGCGGAAGGT GTTGACCAGA CACGTGGCTG GTTCTATACC
CTGCATGCGC TAGGTACTAT GCTGTTTGAT AACGTTGCAT ACAAAACAGT GGTATCAAAT
GGGCTGGTGC TTGACAAGAA CGGGAATAAG ATGAGTAAGA GTGTGGGTAA TGTTGTGGAT
CCGTTCGCTA CACTGGAACA ATATGGGGCG GACGCAACAC GCTGGTACCT TATCACCAAT
GCTTCTCCGT GGGATAGCAT GAAATTTGAT GTAGAGGGGA TCCGGGAGGT ACAGCGTAAA
TTGTTCTCCA CCCTGTATAA TACGTACAAT TTCTTTGCGA TGTATGCGAA CCTGGACAAA
TTCACGTTCA GCGAAGCATA TGTACCGATG GAAGAGCGCC CGGAGATAGA CCGCTGGATT
ATATCCCTGC TGAATACACT GGTGAAAGAC GTTACAGGCT ATTTTGATGA TTACGAGCCT
ACCCAGGCGG GAAGGGCGAT ACAGTCCTTC GTTGACGAGC ATCTGAGCAA CTGGTATGTG
CGTCTGTGCC GTCGCCGTTT CTGGAAAGGT GAGTACGCTC AGGACAAGAT TTCTGCTTAT
CAGACCTTGT ACGAGTGTCT TGAAACACTG GCCCGTTTAA TGGCGCCTGT GTCACCGTTC
TTTGCAGATT GGTTATTTGG CAACCTGAAC AAGGTAAGTG GTCGCCATGC GGAGGCATCT
GTTCACCATA TGCTGTTCCC ATCTGTGGTA ACAACAGCGA TTGATGCGGA CCTGGAAGAA
AGGATGCAGC TTGCGCAGGA TATTTCCTCG CTTGTGTTGT CTCTAAGAAA GAAGGTAAAT
ATTAAGGTAC GTCAGCCGTT ACAGAAGATA CTGATACCAG TACAAAACCT GCATATTAAA
GAACAGATTG AAAAAATTCA AGATCTGATA AAAAGTGAGG TGAATGTGAA AGGTATTGAG
TATCTTACGG AAACGGAAGG TTTTATCAAG AAAAAGATTA AGCCAAACTA TAAATCCCTG
GGTGGTAAAA TGGGGGCCAA GATGAAAGCC GTTGCGGCTG CCATCAGTGC ATTCTCTGCT
GCCGATATCG CATCCCTCGA ACGTAACGGA GAATTTATCC TTCAAATTGA AGATGAACAA
CTGCCTATAC AGTTATCTGA CGTAGAGATC ATCTCAGAAG ATATTCCCGG TTGGACCGTA
ACTAATAAGG GCGCACTTAC AGTGGCGCTC GATATTACTA TTACACCAGA GTTGTTGGAC
GAGGGCAATG CCCGTGAATT AGTCAACCGT ATTCAGAAGA TCAGAAAGGA TAATGACTTC
GAACTGACTG ACAGGATACA GGTAAAAGTG GCAGTAATCG AGAGCTTGAA ATCGGCGATT
ATTAACTATA ATGACTATAT TTGCACGGAA ATTTTGGCAG ATAGTTTGGA ATTAGTGCCG
GAATTACAGG ATGGAATTGA AATAGAAGTA AATGATTTGA CATTCAACGT ATTAGTTAAC
AAAAAAAGCT AA
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| Protein sequence | MASKYQEYNQ LNLPQIEKDI LAHWEEIQAF EKSVSIREGA TPFVFYEGPP SANGMPGIHH
VISRTLKDLV CRYKTMNGFQ VKRKGGWDTH GLPVELGVEK MLGITKEAIG KTISIEDYNK
ACRAEVLKFK DKWDDLTRQM GYWVDLKSPY ITFDNNYIES LWWCLSELYK KNLLYKSVSI
QPYSPAAGTG LSSHELNMPG CYKEVKDTTV VAMFKAIEAD NSAFLFEAAR KIAADAEVFF
MAWTTTPWTL PSNLGLTVGA NIEYTLVRTF NPYTHLPQFV VMAKDLLGKY FKQEGEDGDF
AAYKEGDKII PWQILSVFKG SQLENIRYEQ LLPYVQPESG DPFRVLLGDF VTTEDGTGIV
HTAPAFGADD YRVGQKYDIG ILTLVDRQGK FLDEVGEFGG RYVKNYKNDP EYKDVDVDIS
VKLKRENRAF KVEKYEHTYP HCWRTHKPVL YYPLDAWFIR TTAAKEKMVE LNKTINWKPA
STGTGRFGNW LENMVDWNLS RSRFWGTPLP VWRTVAVKED SPEGAVQKCL GAKNELVGAL
LFVKKDEFKA DVLNADSALS KRIAAHNAQY VGKSKEEQEQ FVINIDKIRA KIQKEEITLV
DVALANFYLT DLVSSYCVAI TEETLADIDL HKPMVDNLIF DHEGQLMYRE PDLVDVWFDS
GAMPYAQWHY PFDNKEEFAK SFPADFIAEG VDQTRGWFYT LHALGTMLFD NVAYKTVVSN
GLVLDKNGNK MSKSVGNVVD PFATLEQYGA DATRWYLITN ASPWDSMKFD VEGIREVQRK
LFSTLYNTYN FFAMYANLDK FTFSEAYVPM EERPEIDRWI ISLLNTLVKD VTGYFDDYEP
TQAGRAIQSF VDEHLSNWYV RLCRRRFWKG EYAQDKISAY QTLYECLETL ARLMAPVSPF
FADWLFGNLN KVSGRHAEAS VHHMLFPSVV TTAIDADLEE RMQLAQDISS LVLSLRKKVN
IKVRQPLQKI LIPVQNLHIK EQIEKIQDLI KSEVNVKGIE YLTETEGFIK KKIKPNYKSL
GGKMGAKMKA VAAAISAFSA ADIASLERNG EFILQIEDEQ LPIQLSDVEI ISEDIPGWTV
TNKGALTVAL DITITPELLD EGNARELVNR IQKIRKDNDF ELTDRIQVKV AVIESLKSAI
INYNDYICTE ILADSLELVP ELQDGIEIEV NDLTFNVLVN KKS
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