| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0397 |
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| Symbol | |
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| ID | 8356503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 473378 |
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| End bp | 474424 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962543 |
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| Product | transcriptional regulator, TraR/DksA family |
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| Protein accession | YP_003120096 |
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| Protein GI | 256419443 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.411835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA GCAAGAAAGT TGCTAGTAAA AAGACCCAGA AAGCGGTAAC ACCGGCTAAA
AAAGCAGCGG CAAAACAGGT TACTCCTGTA AAGAAATCCG CAGCAGCCAA GCCAGCGACG
AAGAAGGCAG CAGCACCTGC AAAGCCAGCT GCGAAAACTT CGGCGCCAAA AGTTGCCACC
AAACAGGTCA AGCCAACTAC AACGCAGAAA GTTGTTGCCA AAAAATCAGC AGTTACCCAG
ACGGCTTCGT CAAGTAAATC TGTAGTAAAG AAAGCACCCG TAGCAGCACA GGCGGTGCCT
CATACCGAAG TAAAGAAAGC AACGGCTCCT GCTAAGCCCG CAGCTTCCGC GAAAGTGCCT
GATACAAAGA AAGTGGTGAC GCCAAGCGTT ACTGCAGATA AAGAAAAACT AATTTCCAAG
CCAGAAGAAA AAGAAGTAAT AATGCCAGTA AATAAAAAAG ACGATAAAGA AAAAGTAGTT
GCTAAAGACG CCAAAAAACC AGCGGACAAA GTACAGAAAG CTGAAAAAGC AGCACCAGCA
GCAAAAGCTG AAAAGCCGGC TGACCGTACT GAGAAAGTTG ATAAAAAAGG CGCTTCCAAA
GCAGCTACAT TAGTAACCTA CCAACCAGAG TTTACTAAAT CTGTTCTCGA TCAGCCAGAA
CAGCCGTCCG GTCCTGTTTA CCGCTATAGT GATACAGATC TGCAGGAATT TAAAGACCTG
ATCCTGAAAA AGCTGGAAGC TGCTAAAAAG GAACTCGTAT ATCTGCAGGG CCTGATCACT
CGTAAAGATG AAGCAGGTAC CGACGATACC GAAAACAAAT ATATGAGCAT GGAAGATGGT
TCCGGTTCTC AGGAAAGAGA ACAGCTGAAC CAGATGGCAA GCCGCCAGAT CCAGTTCATC
GATCACCTCG AGAAAGCACT CGTGCGTATC GAAAACAAAA CTTACGGTAT CTGCCGCGTA
ACCGGTAAGC TGATCGATAA AGCCAGACTG CGTGCTGTAC CGCATGCTAC GCTGAGTATC
GAAGCGAAAC TGGCGAAAAG CAAATAA
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| Protein sequence | MATSKKVASK KTQKAVTPAK KAAAKQVTPV KKSAAAKPAT KKAAAPAKPA AKTSAPKVAT
KQVKPTTTQK VVAKKSAVTQ TASSSKSVVK KAPVAAQAVP HTEVKKATAP AKPAASAKVP
DTKKVVTPSV TADKEKLISK PEEKEVIMPV NKKDDKEKVV AKDAKKPADK VQKAEKAAPA
AKAEKPADRT EKVDKKGASK AATLVTYQPE FTKSVLDQPE QPSGPVYRYS DTDLQEFKDL
ILKKLEAAKK ELVYLQGLIT RKDEAGTDDT ENKYMSMEDG SGSQEREQLN QMASRQIQFI
DHLEKALVRI ENKTYGICRV TGKLIDKARL RAVPHATLSI EAKLAKSK
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