| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0394 |
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| Symbol | |
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| ID | 8356500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 469249 |
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| End bp | 471081 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962541 |
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| Product | ABC transporter related |
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| Protein accession | YP_003120094 |
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| Protein GI | 256419441 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.156666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT TTTTCAGGTT GCTGAGTTTG TCGAAGCCCT ATCACCACTA CGTTCCGGAA
TATGTTGTAT ACATTTTCCT CTATACGCTG TTCAGTCTCG TAAACTTCAC CCTGCTGATT
CCATTAATGG ATACACTCTT TTCCACCGGT AAGCAGGAAG TGGTATCGGT GCTCCCGGAT
TTTTCATTTT CTTTCGCTTA CTTTAAACAG GTATTCTACT TCTATTATAA TGAGTTACTG
GTACATTACA ACGGCAACAA ATTTGCCATA CTGGTATATG TCTGTGTGAT CCTCTTCATC
GCCATCACGC TCAAAAACAT CTTTGGTTAC CTGAGTCAGC GCGTGCTGAC CCGTGTACGT
GTTACCATGG TACGTAAGAT GCGTGAGAAA GTGTTCCACC AGTACAGTAC GCAATCCCTT
TCCTTCTTCC AGAACGAACG TAAAGGGGAT CTGCTCTCCG TGATCAGCTC TGATGTGGTG
GAAGTGGAAA ACTCAGTGGT GACCTCTATG CAGACGGTGC TCCGTGATCC GTTTGTGATT
ATTTCGACCT TTATTACCTT ATTTTATATT TCAAAGGAGC TGACTTTCTT TACCCTTGTT
TTCTTCCCGA TATCTGGTCT GGTGCTCAGT TCTATTTCCA AAAAACTGAA AAAGCAGTCC
GTTCTCAGTC ATGGATTATT AGGTAAACTC CTGAATATCA CGGAAGAAGC ACTGTCCGGC
ATCCGTATTA TCAAGGCATT TAACGCTGAA AAGTTCATCG GAAAGAAATT TGACCAGGAT
AACAGGGCTT TTGCCCGTAC TGTCAAAGCG ATGTCAGACC AGCGTGAAGC TGCGTCTCCG
GTATCTGAAA CCCTGGGCGT ACTGATTGTG ATCGTCATCA TGTTGTATGG CGGCCGTCTG
ATCCTGGCAG GTGATCCTTC ACTGACAGCA TCCGGTTTTA TCGCTTACCT GGGTTTCTAC
TTCCAGATCC TGGCGCCGGC TAAATCTATC GGTAGTGCTT TTACAGCAAT GCCCAAAGGT
CTGGCTGCCG GTGAACGTGT ACTACGTATC CTGGATGCAC CCAATCCGAT CACTGATAAA
GCCAATGCGG AGACACTGGC TGGCTTCGAA AAGAATATCG AATTCAGAAA CGTCACCTTT
GCCTATAATG AAAAGCCAGT GCTGAAAAAT GTTCAGCTGA CTATCGACAA AGGCCGTATG
ATCGCCCTGG TAGGAAAGAG TGGCGCCGGT AAATCGACTA TGGCCGACCT GATTCCGCGT
TTCCATGACG TGACCTCCGG TGCTATTCTC GTTGATGGGA AAGACATCCG TGACGTGAAG
ATGCATGATC TGCGTGCGCT GACAGGTATG GTATCGCAGG AAGCTATCCT CTTCAATGAT
TCCGTATTTA ACAACATTGC CTTCGGACAG GAAAACCCTG ACAGGGAAGA AGTGATCAGA
GCTGCAAAAA TTGCCAATGC ACATGAATTC ATCGTGCAGC TGGAGAACGG TTATGACACC
CCGATCGGTG ACCGTGGTAT GAAACTCAGT GGAGGGCAGC GTCAACGTCT TACTATTGCA
CGTGCTATCT TCAAGAATCC GCCAATCCTC ATCCTGGATG AAGCCACCTC AGCCCTGGAT
ACAGAATCAG AAAAACTGGT ACAGGATGCA TTGGATAAGC TGATGGAAAA CCGCACCACT
ATTGTGATTG CACACCGTTT GTCTACCATC CAACACGCGA ATGAGATCAT CGTAATGGAT
CAGGGAGAGA TAAGAGAGCG CGGCACACAT GACGAGCTAA TCTCTAAAGA TGGTATCTAC
CGTAAACTGG TAGAGATGCA GGAATTCAAA TAA
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| Protein sequence | MKTFFRLLSL SKPYHHYVPE YVVYIFLYTL FSLVNFTLLI PLMDTLFSTG KQEVVSVLPD
FSFSFAYFKQ VFYFYYNELL VHYNGNKFAI LVYVCVILFI AITLKNIFGY LSQRVLTRVR
VTMVRKMREK VFHQYSTQSL SFFQNERKGD LLSVISSDVV EVENSVVTSM QTVLRDPFVI
ISTFITLFYI SKELTFFTLV FFPISGLVLS SISKKLKKQS VLSHGLLGKL LNITEEALSG
IRIIKAFNAE KFIGKKFDQD NRAFARTVKA MSDQREAASP VSETLGVLIV IVIMLYGGRL
ILAGDPSLTA SGFIAYLGFY FQILAPAKSI GSAFTAMPKG LAAGERVLRI LDAPNPITDK
ANAETLAGFE KNIEFRNVTF AYNEKPVLKN VQLTIDKGRM IALVGKSGAG KSTMADLIPR
FHDVTSGAIL VDGKDIRDVK MHDLRALTGM VSQEAILFND SVFNNIAFGQ ENPDREEVIR
AAKIANAHEF IVQLENGYDT PIGDRGMKLS GGQRQRLTIA RAIFKNPPIL ILDEATSALD
TESEKLVQDA LDKLMENRTT IVIAHRLSTI QHANEIIVMD QGEIRERGTH DELISKDGIY
RKLVEMQEFK
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