Gene Cpin_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0393 
Symbol 
ID8356499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp468729 
End bp469103 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content43% 
IMG OID644962540 
Productribosome-binding factor A 
Protein accessionYP_003120093 
Protein GI256419440 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.147401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA GCAAAAGACA GAAACAAATA GGACAGCTGT TACAAAAGGA ACTGAGCGAA 
ATATTTCAGC GGATGGGATT CAACGTGGTA GATGGAGGGA TGATCTCCAT TTCTTCCGTA
AAGTTGACCC CGGATCTGCT GGAGGCAAGG GTGTATCTGA GCATGTTCAA AATAGCTGAT
TCCCATGAAA TGGTGAACAG GATCAAGGAA AGAATGGGTG AAATCAAGAA AGACCTGGGT
AACCGTGTGG GCAAACAATT ACGCCGTGTA CCTGAAATTT CGCTGTTCCT CGATGATACA
CTGGAATATA TCTTCAAAAT GGAAGAGCTG TTCAAAAAGA TCAAAGAAGA CGACGCAGGG
AAGGAAAACA AATAA
 
Protein sequence
MQESKRQKQI GQLLQKELSE IFQRMGFNVV DGGMISISSV KLTPDLLEAR VYLSMFKIAD 
SHEMVNRIKE RMGEIKKDLG NRVGKQLRRV PEISLFLDDT LEYIFKMEEL FKKIKEDDAG
KENK