Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0384 |
Symbol | |
ID | 8356490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 460175 |
End bp | 460957 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962531 |
Product | chromosome segregation and condensation protein ScpA |
Protein accession | YP_003120084 |
Protein GI | 256419431 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.268591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGACA ACTCCTACAA AATAAAATTA CCCCAGTTTG AGGGGCCGTT TGACCTGCTG CTCTTCTTTA TTGAAAGGGA CGAACTGGAC ATTTATAATA TCCCCATTAC TACTATCACC AACGATTTCC TCGATTATAT CCATCACCTG GAATCGCTCA ATATTGAGCT GGCCAGTGAA TTTATCCTGT TCGTATCTAC CCTGATGCGT ATCAAGGCTA AAATGCTGTT GCCTCGTAAG GAACTGGATG AACAAGGAAT AGAGATAGAT CCCCGCCAGG AGTTGATCGA TAAGATATTG GAATACAAAC GTTTCAAGCA GGCAGCCGCT GAACTCGCAG AGCGCGAGGC CGAGCGTATG TTGCAGATCA AACGTGGAAA CATAAAGAAA GAACTGGCCA GCATCGGAGA AGAGACCAGC GAGGGAACGG AAATACAGAC CCTGACCCTG TTCAAGCTGA CCCAGACCTT TGAAAAGGTC ATGCAAAGGG TAAAACAGCG GGAAAACAAG CCTCAGCACG TTGTATACAA ATATGAATAC ACCATGGAAG GCTCCCGTGA ATATATGATA GAGCTGGCGG CCAGCGAAAA GACCCTCGCT TTTGAGAAAA TCTTTGATCA TTGTCGTGAC CGGGTACATG CCATCTTCCT GTTTCTCGGT ATGCTTGAAC TGGTACAGAT GAAATATCTG GGAATTATGG TAGGAGAAGG CAGGAATAAT TTTATAATTG ACTACATTGA GCCTGAGGAC CGGGAGTTAG AAGTTGCCGG TACATTTGAA TGA
|
Protein sequence | MNDNSYKIKL PQFEGPFDLL LFFIERDELD IYNIPITTIT NDFLDYIHHL ESLNIELASE FILFVSTLMR IKAKMLLPRK ELDEQGIEID PRQELIDKIL EYKRFKQAAA ELAEREAERM LQIKRGNIKK ELASIGEETS EGTEIQTLTL FKLTQTFEKV MQRVKQRENK PQHVVYKYEY TMEGSREYMI ELAASEKTLA FEKIFDHCRD RVHAIFLFLG MLELVQMKYL GIMVGEGRNN FIIDYIEPED RELEVAGTFE
|
| |