Gene Cpin_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0384 
Symbol 
ID8356490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp460175 
End bp460957 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID644962531 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_003120084 
Protein GI256419431 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.268591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA ACTCCTACAA AATAAAATTA CCCCAGTTTG AGGGGCCGTT TGACCTGCTG 
CTCTTCTTTA TTGAAAGGGA CGAACTGGAC ATTTATAATA TCCCCATTAC TACTATCACC
AACGATTTCC TCGATTATAT CCATCACCTG GAATCGCTCA ATATTGAGCT GGCCAGTGAA
TTTATCCTGT TCGTATCTAC CCTGATGCGT ATCAAGGCTA AAATGCTGTT GCCTCGTAAG
GAACTGGATG AACAAGGAAT AGAGATAGAT CCCCGCCAGG AGTTGATCGA TAAGATATTG
GAATACAAAC GTTTCAAGCA GGCAGCCGCT GAACTCGCAG AGCGCGAGGC CGAGCGTATG
TTGCAGATCA AACGTGGAAA CATAAAGAAA GAACTGGCCA GCATCGGAGA AGAGACCAGC
GAGGGAACGG AAATACAGAC CCTGACCCTG TTCAAGCTGA CCCAGACCTT TGAAAAGGTC
ATGCAAAGGG TAAAACAGCG GGAAAACAAG CCTCAGCACG TTGTATACAA ATATGAATAC
ACCATGGAAG GCTCCCGTGA ATATATGATA GAGCTGGCGG CCAGCGAAAA GACCCTCGCT
TTTGAGAAAA TCTTTGATCA TTGTCGTGAC CGGGTACATG CCATCTTCCT GTTTCTCGGT
ATGCTTGAAC TGGTACAGAT GAAATATCTG GGAATTATGG TAGGAGAAGG CAGGAATAAT
TTTATAATTG ACTACATTGA GCCTGAGGAC CGGGAGTTAG AAGTTGCCGG TACATTTGAA
TGA
 
Protein sequence
MNDNSYKIKL PQFEGPFDLL LFFIERDELD IYNIPITTIT NDFLDYIHHL ESLNIELASE 
FILFVSTLMR IKAKMLLPRK ELDEQGIEID PRQELIDKIL EYKRFKQAAA ELAEREAERM
LQIKRGNIKK ELASIGEETS EGTEIQTLTL FKLTQTFEKV MQRVKQRENK PQHVVYKYEY
TMEGSREYMI ELAASEKTLA FEKIFDHCRD RVHAIFLFLG MLELVQMKYL GIMVGEGRNN
FIIDYIEPED RELEVAGTFE