Gene Cpin_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0377 
Symbol 
ID8356482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp454431 
End bp455483 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content49% 
IMG OID644962523 
Productferredoxin 
Protein accessionYP_003120077 
Protein GI256419424 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.88135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TGTATATACA CCTCCGCATC AGGGAGGTCA TAGCGGAAAC AGCAGATACA 
TTTACTTACA GACTGGAGAC TGTCGACGGA CAGCCATTGC ACTATCAGCC GGGTCAATTC
ATTACATTGC TGATCTATCT GCACGGTACG GAATACAGAA GGTCTTATTC CTTCAGTTCT
ACGCCCGGCA TTGATCCTTA TCCGTCTGTA ACAGTCCGGG AAAAGCAGAA TGGCGAGATA
TCCCGTCATA TATTGCGCGA CTGGAAAGTT GGTGACAAGA TCACAGCGCT GTTGCCTTCC
GGACGTTTTA CATTACCCGC TCACAGTAAG ACTCCCAGGG ATATCTTTTT ACTGGGCGCC
GGCAGCGGTA TAACGCCTTT ATATTCAATC CTGAAAGACG TGCTGCATCA TGAACCCACT
GCACATGTCA AATTAGTATA CAGCAATCGC TCTGAACAGC GGACTATCTT CCATCAACAA
TTACAGGCAC TTAAAGCACA GTTTCCTGAA CAGTTGCATA TCATACACCT GTACAGCAGC
GAGCCGCCTG ATCATATCAT ACGCCGGCTG GGTAACCTCT CCCTGGAACC ACTGGTACAG
CAACAGCTAC GCTATCATAA ACAGGACGCC CAGTTCTTTG TGTGCGGACC TCCTGAATAT
ATGCGTATGG CGCTCTTAAC GCTCACTTTT ATGGGCTTTG AAGAGGAACA GCTGCATAAG
GAGAATTTCG TCGTAAATAC CGCGCCGCAA CTGGCAAGAA TAGGTGTACC GGATGATGCC
TCCCGGAAAG ATGTGACAAT ACATTTCCGC GGGGGAGTAC ATCAGCTTTC CCTTCCCGGC
AATCGTAATA TACTGGCGGC AGCACTTGAG CAAGGCATAG CAATACCTTA CAGCTGTAAA
GGAGGTGTTT GCGGATCCTG CACGGCCCGT TGTACAAAAG GTAAAGTGTG GATGGCCCTG
AATGAAGTAT TAACGGACAA AGAGGTAGAA CAGGGCTTTG TCCTCACCTG CACCGGTTAT
GCGGCTAGTG CAGCGGTAGT GATAGAGCTA TAA
 
Protein sequence
MDELYIHLRI REVIAETADT FTYRLETVDG QPLHYQPGQF ITLLIYLHGT EYRRSYSFSS 
TPGIDPYPSV TVREKQNGEI SRHILRDWKV GDKITALLPS GRFTLPAHSK TPRDIFLLGA
GSGITPLYSI LKDVLHHEPT AHVKLVYSNR SEQRTIFHQQ LQALKAQFPE QLHIIHLYSS
EPPDHIIRRL GNLSLEPLVQ QQLRYHKQDA QFFVCGPPEY MRMALLTLTF MGFEEEQLHK
ENFVVNTAPQ LARIGVPDDA SRKDVTIHFR GGVHQLSLPG NRNILAAALE QGIAIPYSCK
GGVCGSCTAR CTKGKVWMAL NEVLTDKEVE QGFVLTCTGY AASAAVVIEL