Gene Cpin_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0368 
Symbol 
ID8356473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp440506 
End bp441423 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID644962514 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_003120068 
Protein GI256419415 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACA GGATCTTGTT TGCAACTCAA CGTTATCAGT ATCTGAAAGA CAGATTATTG 
ACGCTTGTTC CGGAATGGGA AGAAGGGAAA TTGGATATCC GGGATTTTCC TGATGGGGAA
CATTATCACC GTATCAATTC CAATGTCACC AACAAAGAAG TGATATTACT GGGAGGTACG
ATCGATGACA AGGAGACATT AGAACTTTTT GATATTGCGC ATGGCTGTAT CCAGGAAGGC
GCGTGCGCTG TCAATATCGT CATTCCGTTT TTCGGTTATT CCACAATGGA AAGAGCGGTA
AAATCAGGAG AGATTGTGAA GGCAAAGACC AGGGCAATCC TGTTTTCGAC ACTTCCGCCC
ACCACATCGG GGAATAAAAT ACTGATGCTG GATCTTCATG TGGATGGCAT TACCTACTAC
TTTGAGAATA GTATACGTCC TGTACATCTT TACGGGAAAG ACCTGGTAAA AGAAGCGGCG
CTTGAAATAG CCGGCGACAG ACCTTTTGTG CTGGCCAGCA CAGATGCCGG TCGTGCGAAA
TGGGTAGAAT CCCTCGCCAA TGATCTGCAT GTATCAGCAG CATTCGTATT TAAAAAACGC
CTCTCCGGAG AAGAAACACA TATCACGGCG ATCAGTGCCG ATGTACAGGA TAAACTGGTG
ATCATCTATG ATGACATGAT CCGTACAGGA GGATCGCTTA TAAACGCAGC AGAAGCCTAT
TTACAGGCAG GTGCTTCAGA AATAGCCGTT ATCACTACTC ACGGAATTTT TGCCGGAAAT
GGCTTTAATA AGATCAAACA AAGTGGTATT ATCAAACGGG TGATATGTAC CGATACTCAC
CCCAATGCCC TCACGATTAA AGATGAAATG CTCACAATTA AATCTGTAGA TAAGCTTATC
GCAGATTACT TTAACTAG
 
Protein sequence
MPHRILFATQ RYQYLKDRLL TLVPEWEEGK LDIRDFPDGE HYHRINSNVT NKEVILLGGT 
IDDKETLELF DIAHGCIQEG ACAVNIVIPF FGYSTMERAV KSGEIVKAKT RAILFSTLPP
TTSGNKILML DLHVDGITYY FENSIRPVHL YGKDLVKEAA LEIAGDRPFV LASTDAGRAK
WVESLANDLH VSAAFVFKKR LSGEETHITA ISADVQDKLV IIYDDMIRTG GSLINAAEAY
LQAGASEIAV ITTHGIFAGN GFNKIKQSGI IKRVICTDTH PNALTIKDEM LTIKSVDKLI
ADYFN