| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0364 |
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| Symbol | |
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| ID | 8356469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 433875 |
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| End bp | 434963 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962510 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003120064 |
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| Protein GI | 256419411 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.405995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA ATAAGAAGAT CCTGACAACT GTTTTATTCC TGATAGTGGC TGCTGTCATT
GTCGGTTTTA TCATTAACAG AGTGAATGCT CCAGGGAAAA AAGGGGAAAA TGCTCCTGAA
AAATCAAATG CGAAAGGTGG CGGAGGCCCG AAAAACCTCC TCGTGGACTA CTATGTTGTA
AAGACCAGTT CTCTGAACGA GACGATAGAA GCGAGCGGAA CCCTGCAAAG CAATGAAGAA
GTGCAGGTAC AGGCAGAAAT TACCGGTCGT GTTACAGGAC TCTTCTTTAA AGAAGGTACC
CAGGTGGCCA AAGGCGCCCT GCTGGTGAAA ATCTATGACG AAGACCTGAA AGCCCAGCTG
CAGAAGCTGG AATTACAACG TGAACTGGCT AAAACCACAC TCGAAAGACA GGAAAATCTC
CTTAAAATAA ATGGTATCAG CCGCCAGGAC GTCGACGTTA CCCGTAACCA GGTAAGCGCT
TATGGCGCTG ATATCGAATA TACCCGTACT CAGCTGCAGA AAACGGAACT CCGCGCACCA
TTCTCCGGTC GCCTCGGCCT CCGGAATGTC AGCCTCGGCG CTATCGTTAC ACCTGCTACA
GTTATTACCA CCCTCCAGCA GATAGATCCC CTGAAAGTAG ACTTCTCCGT ACCGGAAAAG
TACCGTACAG CTATCGCACA GGGTGATGTG GTAGATTTCA AAGTAGCCGG CGATAACCAG
ACGTATAAGG GTAATATCTA TGCCCTCGAT CCGAAAATCG ATCTGTCTAC GCGTACCATC
AGGATCAGGG CGATCGTTCC TAATGCCGGT AAATTGCTGC CAGGCGCCTT TGCACGTGTA
CTCATCGCAC TGAAAAATAT GCCCGACGCT ATCATGATTC CTACCCAGGC CGTAATACCT
GGTACGCGTG ATAAAAAAGT AGCGATCGCT GACAGCGGAA AAGCGAAATT TGTAGTAGTA
GAGACAGGCA TCCGCAATGC AGACAATGTA CAGATCACCA GCGGACTCAA CGTAGGTGAC
ACCGTGATCA CCAGTGGTAT TATGCAGATC AAACCAGGAC TGGTGCTTAA ATACAATGAC
GTTAAATAG
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| Protein sequence | MAGNKKILTT VLFLIVAAVI VGFIINRVNA PGKKGENAPE KSNAKGGGGP KNLLVDYYVV
KTSSLNETIE ASGTLQSNEE VQVQAEITGR VTGLFFKEGT QVAKGALLVK IYDEDLKAQL
QKLELQRELA KTTLERQENL LKINGISRQD VDVTRNQVSA YGADIEYTRT QLQKTELRAP
FSGRLGLRNV SLGAIVTPAT VITTLQQIDP LKVDFSVPEK YRTAIAQGDV VDFKVAGDNQ
TYKGNIYALD PKIDLSTRTI RIRAIVPNAG KLLPGAFARV LIALKNMPDA IMIPTQAVIP
GTRDKKVAIA DSGKAKFVVV ETGIRNADNV QITSGLNVGD TVITSGIMQI KPGLVLKYND
VK
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