Gene Cpin_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0362 
Symbol 
ID8356467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp431979 
End bp433232 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content48% 
IMG OID644962508 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003120062 
Protein GI256419409 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.719196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAA GACGAGTAGT CGTTACAGGT TTAGGCGCAC TTACACCGCT CGGCAATTCC 
ATATCCGACT TCTGGAAGGG ATTGACGGAC GGTGTATCCG GTGCCGGCCC TATTACACAT
TTTGATGCTG CCAAGTTCAA GACCCGTTTT GCTTGCGAAC TGAAGAACTT TGACGCTACC
AATTTTCTGG ACAAAAAGGA TGCACGCAAG ATGGATCCTT TTACGCAGAC CGCTGTGATT
GCTGCCGACC AGGCAGTACA AGACGCCGGG ATTAACCGCA ATACTGTCAA TATTGACAGG
GTTGGGGTGA TCTGGGCTTC CGGCATTGGT GGTATGATCA ATTTCTGCCA GGAAATGAAA
GAATTTGGTC AGGGTGATGG AACTCCCCGT TTCAGTCCTT TCCTGATTCC CCGGTTAATC
CTTGATATTG CCGCTGGGCA TATATCTATA CGTCACGGCT TCCGAGGTCC TAACTTCTCA
GTAGTCTCTG CCTGCGCTTC TGCTACCAAT GCTATTATTG AGGCTATGCT GTATATTCAG
TTTGGTAAGG CGGATGTGAT GATCACCGGA GGATCAGAAA ACGTTATTAA CGAAGCCTGT
ATAGGTGGGT TTAATGCGAT GAAGGCCCTG TCTGAACGAA ATGATGACCC AAGAACCGCT
TCCCGCCCCT TTGATCTCGA CAGAGATGGC TTTGTCATGG GGGAAGGCGC TGGTGGACTG
GTGTTAGAAT CCTATGAACA TGCGACGGCA AGAGGAGCCA AAATTTACGC TGAATTGGCC
GGAGGCGGCG CAACTGCCGA TGCCTATCAC CTTACAGCAC CACATCCGGA AGGACTTGGC
GCAATGAATG TAATGCGGTT GGCCTTAGCA GAAGCGGGAA TGCAACCCCA TGATATTGAT
TATATTAATG TGCACGGAAC GTCTACACCT CTGGGTGACA TTGCGGAAGT AAAAGCTATC
CAACAGGTTT TCGGGGAACA TGCTTACAAT CTGAACATCA GTTCCACGAA ATCTATGACC
GGGCACCTCT TAGGCGCTGC CGGAGCAATT GAGGCCATCG CTGCTATTAT GTCTATAATA
CATGGTATTG TACCTCCTAC CATCAATCAT TTCATGAAAG ATCCGGAGCT GGATCCCAAA
TTAAATTTTA CCTTTAACGT CGCACAACAT AGAGAAATCA ACGCTGCATT AAGTAACACC
TTCGGTTTTG GAGGGCATAA TGCATCTGTT ATTTTCAAAA AATTTGTTGC TTGA
 
Protein sequence
MQPRRVVVTG LGALTPLGNS ISDFWKGLTD GVSGAGPITH FDAAKFKTRF ACELKNFDAT 
NFLDKKDARK MDPFTQTAVI AADQAVQDAG INRNTVNIDR VGVIWASGIG GMINFCQEMK
EFGQGDGTPR FSPFLIPRLI LDIAAGHISI RHGFRGPNFS VVSACASATN AIIEAMLYIQ
FGKADVMITG GSENVINEAC IGGFNAMKAL SERNDDPRTA SRPFDLDRDG FVMGEGAGGL
VLESYEHATA RGAKIYAELA GGGATADAYH LTAPHPEGLG AMNVMRLALA EAGMQPHDID
YINVHGTSTP LGDIAEVKAI QQVFGEHAYN LNISSTKSMT GHLLGAAGAI EAIAAIMSII
HGIVPPTINH FMKDPELDPK LNFTFNVAQH REINAALSNT FGFGGHNASV IFKKFVA