Gene Cpin_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0348 
Symbol 
ID8356453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp412838 
End bp413650 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content49% 
IMG OID644962494 
Producthypothetical protein 
Protein accessionYP_003120048 
Protein GI256419395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA AACCTTATCT CCACCATACG ATTGCGTTGT TGCTGTTTGT CTTGCTGACA 
GCCTGCAACA AGGCAGACTA TCTTGATGTG AATGCGGGAG AAAGACCGCC ACTCAGTGCA
CAGATCAGTT TTGTCAATGC ACGTCCGGCA GATGTGCCTT TGCAGTTCTG GATATTTACT
ACCCAGGTGA CGACAACTGC GGTAGGTATC AATCAGGCAT CGCCTTATTT ACCTGCTTTA
TTCGGTAACG TACAGATCAA TTTCACAGAA GGTACAGGCA CCAGTTATAA GTTATCCCGT
CAGTTTGGTA ACCAGGCTAC TTTCTCTGCG AATGGAGGAC CTAATGGTCC AATAGCCGGC
TACTATCATA CGGTGTTTGC TGCCAGGGCG AAAACAGATA TTACAAAAGA TACCCTCATA
CTATTCTATG ATAACCCGCA GCCGCCTGCT GCCGGTAAGG CCAAGTTACG CTTTGTGCAC
CTGGCGCCGT CCATTCCCAC CGTACAGGTG TCATTACAGC AGCAAGGACA TGAAAGCCTG
CTGTTTGACA CGGTGGATTA CGGCCGTGCG GGAGGATCCG TATTATCAGG AGACAATCTG
AATGCCTGGT CATTAGGCCC TTTTGTAGAA GTACCGGCGG GTGCTTCCGC AGTGGTGGTC
AGTACCGTGG CGGATCGTCA GCCACTGGCG ATTGATAAGG AAGCCTTTTC CAATCTGCTA
TTGGAAGCGG GTAAAAGCTA TACGGTCTTT CTGAATAGCG TACCAGGCAA AGCAGCGACA
GGAGGCGCTA TCGTCACTCA TTTTGCGAAC TAA
 
Protein sequence
MKKKPYLHHT IALLLFVLLT ACNKADYLDV NAGERPPLSA QISFVNARPA DVPLQFWIFT 
TQVTTTAVGI NQASPYLPAL FGNVQINFTE GTGTSYKLSR QFGNQATFSA NGGPNGPIAG
YYHTVFAARA KTDITKDTLI LFYDNPQPPA AGKAKLRFVH LAPSIPTVQV SLQQQGHESL
LFDTVDYGRA GGSVLSGDNL NAWSLGPFVE VPAGASAVVV STVADRQPLA IDKEAFSNLL
LEAGKSYTVF LNSVPGKAAT GGAIVTHFAN