Gene Cpin_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0341 
Symbol 
ID8356446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp406528 
End bp407088 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID644962487 
Productputative cytochrome c, class I precursor 
Protein accessionYP_003120041 
Protein GI256419388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTATT GGGCCTGCGT TGCAGGTATT GCTATGATTT CATGTGAACG CCGTGCCAAT 
ACTGCGCCAA CGCATTTCGG CTATGGTCGT CCTGCTACAC AGCAGGAGAT CGCAGCAAAA
GCAATAGCTA TTCGTCCCGA TGGAAAAGGA TTGCCAGCAG GTAGTGGCTC TGTACAGCAA
GGGCTCGTTG TCTATGCGAC AAAGTGCGCT TCCTGTCATG GTGTGACTGG TGTAGAAGGA
CCATTCAACA TACTGGTAGC GCCAGATACG GCAGATGCAG TTCCTTTTGA CCGTGCTCCG
CAACGGGTGA AGGCCATCGG GAATTACTGG CCGTATGCTA CGACCGTATT CGATTACGTA
CGACGTGCCA TGCCTTTTAA TGCACCCGGC TCCTTATCAG ATAATGAAGT ATATAGTGTC
ACGGCATATC TGCTGTATGC TAACAGACTG ATAGATAGTG CTGCTGTCAT GAATGCGAAA
ACCTTGCCCG GCATTGTTAT GCCGGCCCGA AAATACTATG TCACAGACAA CCGGAAGGGA
GGGGATGGAC CATATGAATA A
 
Protein sequence
MPYWACVAGI AMISCERRAN TAPTHFGYGR PATQQEIAAK AIAIRPDGKG LPAGSGSVQQ 
GLVVYATKCA SCHGVTGVEG PFNILVAPDT ADAVPFDRAP QRVKAIGNYW PYATTVFDYV
RRAMPFNAPG SLSDNEVYSV TAYLLYANRL IDSAAVMNAK TLPGIVMPAR KYYVTDNRKG
GDGPYE