Gene Cpin_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0340 
Symbol 
ID8356445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp405268 
End bp406485 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content51% 
IMG OID644962486 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_003120040 
Protein GI256419387 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA AGATGACGCG TCGTCGCCTT TTGCTCGGAG GTGCCGCCAC AGCTGCTGTA 
GCTATGGTTA AGTCATCCTT TGGCAAAATG GTGCAGACAG GTATTCCCGA AGCTGCTATA
GACCCGACCA AACAGGTGGG GCCACTACCT GGCATTTTGG GTACGAGATC GCCGTTTGAA
CATCCGCAGC GAAAAGCATC ACTCACTTCA TCGCAGACGC CGTTGCAGGA CCTTTACGGA
ATCATTACAC CGTCTGATCT GCATTTCGAA CGTCATCATG CCGGTGTACC CGCCATAGAT
CCCAATACCT ATGAACTCAC CATACACGGT ATGGTAGACC GTCCTACCGT CTTCACCCTG
GCTGATCTTA AACGATTTCC TTCCGTATCC AGAATCTGTT TTATCGAATG CTCCGGCAAC
TTCCGTAAGC CGGATAAAGA AACGATTACG CCGCAGGATA TCTGCGGGCT CACCAGTCAG
AGCGAATGGA CCGGGGTGAT GCTATCTACT ATTTTCAGGG AAGTAGGCGT GGATCCAAAG
GCTACCTGGT TCCTTGCCGA AGGATCAGAC GCCGCCGTCA TGACGCGTAG CATTCCCGTC
AGCAAAGGAT GGGACGATGC TATGATTGTT TATGCACAAA ATGGGGAGGC CATTCGCCCC
CAGCAGGGAT ACCCGGCCCG GCTGCTGTTA CCGGGGTGGG AAGGCAACAC CAGTATCAAA
TGGCTGCGCC GTATTGAATT GTCAGACGGT CCTTTTATGA CCCGTGAAGA AACATCGAAA
TATACGGAGC CTGTAAAAGA TGGGAAGATC CGTCAGTTCA GTTTTACGAT GGATGCCCGC
TCTATCATTA CCTATCCTGC GTATCCTGTA CAACTGCAGA AAGGCTGGGT AGAAATCAGG
GGTATTGCTT GGAGCGGACG TGGAAGAATA ACGGGTGTGG AAGTCAGTAC CAACGCAGGG
AAAACCTGGC AGGCCGCCCG GCTGCAGGAA CCCGTCATGG ATAAAGCGCA TACCTACTTC
AGGTATCTAT GGCAATGGGA TGGCGATACA ACAGAGATCA TGAGTCGCGC AACAGATGAA
ACAGGCTATA CACAACCTTC ACTCAAAGAG CTGATCGCAG CAAGAGGTAT AGGCACAGGA
TATCACCTGA ATCCCGTAAC AGCATGGCTG GTAAAACGGG GCGGAGAAGT CGTATACAGA
CCGGAAAAAT GGAAATAA
 
Protein sequence
MSQKMTRRRL LLGGAATAAV AMVKSSFGKM VQTGIPEAAI DPTKQVGPLP GILGTRSPFE 
HPQRKASLTS SQTPLQDLYG IITPSDLHFE RHHAGVPAID PNTYELTIHG MVDRPTVFTL
ADLKRFPSVS RICFIECSGN FRKPDKETIT PQDICGLTSQ SEWTGVMLST IFREVGVDPK
ATWFLAEGSD AAVMTRSIPV SKGWDDAMIV YAQNGEAIRP QQGYPARLLL PGWEGNTSIK
WLRRIELSDG PFMTREETSK YTEPVKDGKI RQFSFTMDAR SIITYPAYPV QLQKGWVEIR
GIAWSGRGRI TGVEVSTNAG KTWQAARLQE PVMDKAHTYF RYLWQWDGDT TEIMSRATDE
TGYTQPSLKE LIAARGIGTG YHLNPVTAWL VKRGGEVVYR PEKWK