| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0339 |
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| Symbol | |
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| ID | 8356444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 402104 |
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| End bp | 405235 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962485 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003120039 |
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| Protein GI | 256419386 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCA CCTTCTATTA CAGACACCCT GTGATGCGCA GATTCGTCCG GAATGCCGGC
TTTCTGCTGA TTCCCGCTGT ACTGGGCAGC ACTGCCATGA GGGGCGCTGT TTTTCCGGAT
GCAGTCAGCA GTACACTATC TGACCGCCTA CCTGCAGATA TCCCGGTAAA AGGAAAAGTC
ACTGATACTA ACGGACAGCA ACTCCCTGGT GTAAGCGTTA TTGTGAAAGG CTCCAAACGC
GGCGCTCTTA CCCGTATAGA CGGGTCTTTC GAACTGAATG CGCCCGCAGA TGCCGTACTC
GTTTTTACTT ATATCGGGTA TAAGCCACAG GAAATAAAAG TGGGTAGCAA TGCCTCTTTT
CATGTTCAAC TGGAAAATGA CGATAAAAAG CTAAGTGAGG TCGTGATTGT CGGGTATGGT
ACCCAGGAGC GCCGGAACCT TACCAGCTCT GTGTCTACAA TCAATACTTC TGAAACAAAG
AATATTCCCG TAGCAGGTTT TGATGCTCAG CTACAGGGTA AAGCCGCTGG TCTGCAAATC
AATTCTAATA CCGGCGTACC AGGGGATGGT GTATTTGTAC GTGTACGCGG TACGACTTCT
ATCAATGCCG GTAATGATCC GCTGTATGTA GTAGATGGTG TGTTTGTGAA TAATACCAGT
CTGCAGACTG TCAGCACCGG CGGCCGTGCC ACCTCTCCTA TTGCAGATAT CAACCCGGGC
GATATCGCCA GTATAGAGGT ACTGAAAGAT GCCAGTGCAA CGGCAATATA TGGTTCACGT
GGCGCCAATG GTGTCGTGAT CGTGACGACC AAACGTGGTA ACTACGGACA AAAAACCAAA
GTCAACGTGA ATGTATCACA TGGCTTTGCC AAGGCGCCGG AATTGTGGGA TCTGACCACT
GGTCCGGAAC ATGCGGCATT AATCAATGAA TACTGGATCA ATACAGGGAT AGATAATCCT
GCGTCTAATC AGACTTTTGC CAACAGACCT TTTCGTCCTG TAGCAGAAGG TGGCCGCGGA
TTACCGGAAG AACAAAAAAC CTATGACAGA TTGGGTGAAT TATTCCGTAC CGGACAACTG
GCTAACTACG ATCTGTCCCT GAATGGTGGC GGCGATAAAA CCAAATTCTA CATTGGTGCA
GGTTATACCA AACAGGAAGC GAATATCCGG CCAGTGTTCT TCGAAAGAGC CAGTCTGAAA
CTCAATATCG ATCATAAGAT CAGTGATCGT GTACAGGTAG GTGTGAGCAA TGGTATCACA
CGTTCCTACA GGAACCAGGC ACGCGCAGGT GATGGTCCGC AGGGAGGTTT GCTGCAATCC
GCACTGCACA CGCCTACTTA CTTGCCGGAA ACGAATGCCG ACGGTACGCC TGCCCGCTGG
GCCGGTTTTG ACAACCTGCA GGTGCTGCTG GATAACTACG ATGTAAATAC GGTGAGCCTT
CGTTATATCG GCAACCTGTA TGCAGAAGCC GAAATCCTGC CGGATCTGAA GTTCCGTACC
AGCTGGAGCG TTGATTATAA CAACTACGAC GAGTCTGAAT ACTGGAATGA TAAAACACAG
CTGGGTGCTG CACCGACTTA TGGTCTGGCA ACATCTTCCA TCACACAGAA CAGTACCTGG
ATCAATGAGC AGACCTTATC TTATCGTAAG AAACTCGGCC GCGGACATAC CTTCGGTGCG
GTAGTCGGTA ATACGGTACA ACAGAATACC CTGAAACGCA CTTTTGCACA GGGTACAGGA
TTTCCGAATA ATTCCTATAC GGACATTTCA TCTGCCTCTA CCCGTACTTC CGGTCAGACC
TGGACACAGG GTACGCTGGC ATCTTTCTTT TCCCGACTCG ACTATAACTA CGACAGTAAA
TACTATCTCG AATTCAGTTT CCGTGCTGAT GGTTCTTCCC GTTTTGGCAG TAATCACCGC
TGGGGTTACT TCCCTGCAGT AGGCGCCGCA TGGCGTCTGA AGGAAGAGCA GTTCCTGAAA
GATGCGCAGT TTCTCAGTGA CCTGAAATTA AGAGCCAGCT ATGGCGTAAC CGGTAACCAG
AGCGGTATCA ATGATTTTGC TGCCCGTGGT TTGTGGACAG GCGCCAGTGG TTATCCGGAT
GCCGAGACAG GTGGCGATAA ACCAGCTACA GCACCCTTAC AGTTATCGAA TCCTGATCTG
CGTTGGGAGA AGACCAAACA GGCCAATATC GGACTGGATG CTGCCTTCCT GGATGGACGT
CTTTCTGTGG AGCTGAATGT TTATTCGAAG AAAACCTCTG ACGTACTGTT ACAGCTACCT
GTACCATCCA ATACCGGTTA TTCCACTTAC TACTCCAATG CAGGAGAGAT CAGCAACAAG
GGATATGAGG TGGCTATCCG TTCAGAAAAT ATCAAAAGAG GCGATTTCAC CTGGAATACT
TCCTTCACTA TTTCCGGCAA CAAAAACAAG GTAGAGAAAC TGCCGGTGCC TATTACCCAG
TATAACCGTG ACTGGATCCG GATGCAGCAG GGGTATTCCA TGTATTCATT CTGGATGTAC
AAACAACTGT ATGTAGATCC TAAGACAGGT AATGCGGTGT TTGAAGATGT AAATGGAGAT
GGCAGCATTA CAGTGGCAGA CAGGCAGATT GTAGGGAATG CATTGCCTAA GTTCTTTGGC
GGTATCAATA ACAGTTTTTC CTGGAAGTCA TTTGATGCGT CTGTACAGTT CAACTACCAG
TACGGTAATA AGGTGTTAAA CCTGAACCGC TTCTTTGGAG AAGGTGGCGG TACCCGTGAC
GCGAACAGGG TATTGTTTGC CAGTCAGCTG AAACGCTGGC AGAAAGAGGG CGATGTGACA
GATGTACCAA GACTGACGAA AGTAGGTAAT AACTACACAC TGGAGCAGAA CAGCCGCTTT
ATCGAAAATG GTTCCTTCCT GCGTTTACAG GCGCTGACAT TGGGTTATAC CCTGCCGAAG
GCATTGACGA GCCGCTGGCA TATTGATGCG CTGCGCGTCT ACTTTGCCGG TAATAATCTC
TGGTTGCTGA CGAAGTATAC CGGTCCTGAT CCGGAAGCAA ACGTATCGGC TTCGCAGACG
GTACAGGGGA TTGACCTGGG TACACCCCCA CAGTCGAGGA CTTTACAGTT TGGGGTAAAT
GTGACATTGT AA
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| Protein sequence | MSTTFYYRHP VMRRFVRNAG FLLIPAVLGS TAMRGAVFPD AVSSTLSDRL PADIPVKGKV
TDTNGQQLPG VSVIVKGSKR GALTRIDGSF ELNAPADAVL VFTYIGYKPQ EIKVGSNASF
HVQLENDDKK LSEVVIVGYG TQERRNLTSS VSTINTSETK NIPVAGFDAQ LQGKAAGLQI
NSNTGVPGDG VFVRVRGTTS INAGNDPLYV VDGVFVNNTS LQTVSTGGRA TSPIADINPG
DIASIEVLKD ASATAIYGSR GANGVVIVTT KRGNYGQKTK VNVNVSHGFA KAPELWDLTT
GPEHAALINE YWINTGIDNP ASNQTFANRP FRPVAEGGRG LPEEQKTYDR LGELFRTGQL
ANYDLSLNGG GDKTKFYIGA GYTKQEANIR PVFFERASLK LNIDHKISDR VQVGVSNGIT
RSYRNQARAG DGPQGGLLQS ALHTPTYLPE TNADGTPARW AGFDNLQVLL DNYDVNTVSL
RYIGNLYAEA EILPDLKFRT SWSVDYNNYD ESEYWNDKTQ LGAAPTYGLA TSSITQNSTW
INEQTLSYRK KLGRGHTFGA VVGNTVQQNT LKRTFAQGTG FPNNSYTDIS SASTRTSGQT
WTQGTLASFF SRLDYNYDSK YYLEFSFRAD GSSRFGSNHR WGYFPAVGAA WRLKEEQFLK
DAQFLSDLKL RASYGVTGNQ SGINDFAARG LWTGASGYPD AETGGDKPAT APLQLSNPDL
RWEKTKQANI GLDAAFLDGR LSVELNVYSK KTSDVLLQLP VPSNTGYSTY YSNAGEISNK
GYEVAIRSEN IKRGDFTWNT SFTISGNKNK VEKLPVPITQ YNRDWIRMQQ GYSMYSFWMY
KQLYVDPKTG NAVFEDVNGD GSITVADRQI VGNALPKFFG GINNSFSWKS FDASVQFNYQ
YGNKVLNLNR FFGEGGGTRD ANRVLFASQL KRWQKEGDVT DVPRLTKVGN NYTLEQNSRF
IENGSFLRLQ ALTLGYTLPK ALTSRWHIDA LRVYFAGNNL WLLTKYTGPD PEANVSASQT
VQGIDLGTPP QSRTLQFGVN VTL
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