Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0335 |
Symbol | |
ID | 8356440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 396238 |
End bp | 397668 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644962481 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003120035 |
Protein GI | 256419382 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000674369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAATT CATACGACGC TATTGTCATC GGCTCAGGAC CTAACGGACT CGCGGCAGCG ATACTCCTGC AACAGCAGGG TTTATCCGTG CTTGTGATAG AAGGCCGTGA CGAGATCGGT GGAGGTTTAC GATCCAAGGA ATTGACATTG CCGGGATTTA CGCATGATAT CTGTTCTGCT ATTCATCCTA TGGCGCAGAC GTCGCCTTTC TTTAGCCAGT TGCCGTTGGC GCAGTTTGGC TTATCTTTTC TCCATCCTGT AGCGGATGCT GCGCATCCTT TTGATGATGG AACGGCGGCC GTGTTGTATT CTTCCCTGGA GAAAACGGCT GAGTTACTGG GTAGTGACCG TCAGACTTAT GAGCGGCTGT TTCGTCCCTT ACTACAAGAT TTTAAAGATC TCTCTGAAGA TATACTGGGC CCTTTGCAGC TGCCGAAACA TCCGTTAACG ATGGCTAAAT TCGGATTGAA GGCATTACCT TCTGCTATGC ATCTGGCGAA GCGTTTTAAG ACAAGGGAAG CACGTGGATT GTTTGGAGGA GTGGCTGCAC ATGCGATACA ACCTTTGACA AATATTGCGA CTTCCGCGAT AGGACTGGTG TTAATGGCGA ATAGTCATGT AAGTGGATGG CCTGCGCCGA AAGGAGGCGC ACAGTCGCTG GCCAATGCAT TGGGCGCTTA TTTTACTTCA TTAGGTGGAG AGATCGTGAC AGGAAACTTT GTCAAGGCAT TAAAGGAGTT GCCGCCTTCG AAGGCAGTGT TACTGGACGT TACGCCGAAG CAGTTATTAC AGATTGCGGG CGAAAGATTT ACTTCATTTT ATAAATGGCA GCTGAAACGC TATAAATACG GGATGGGCGT ATTTAAGGTA GACTGGGCGC TGGATGGCCC CGTTCCTTTT ACAGCGGCAG CTTGCAGAGA AGCAGGTACG ATTCACCTGG GTAATACCAT TGAGGAGATA GCCACCAATG AGCAACGTAC CGTGGATGGT CAGCATCCTG AATTACCTTA TACCTTGTTT GTACAACATA GTATTTTTGA TAAAACCCGG GCTCCGGAAG GCAAGCATAC GGCCTGGGGC TATTGTCATG TACCGAATGG TTCTACCAGA GACATGACTG CCGCGATTGA AAACCAGGTG GAGCGTTTTG CACCCGGTTT TAAGGATCTG ATTATCGGCA GGCATGTGAT GAATACCGCC GATGTAGAAG CATATAACCC TAATTATATC GGGGGAGATA TTAATGGTGG TCTCCTGGAT ATTACACAAC TCTACACCCG CCCAGCTTTG AGATGGTCAC CCTATACGAC GCCTGCTAAG GGCATTTACG TTTGTTCCTC TTCAACACCT CCCGGTGGAG GTATTCATGG TATGTGTGGT TATCATGCGG CGAAGAAGGC ATTAAAAGAT GTTTTTGGCG TCCGCCTGTA G
|
Protein sequence | MKNSYDAIVI GSGPNGLAAA ILLQQQGLSV LVIEGRDEIG GGLRSKELTL PGFTHDICSA IHPMAQTSPF FSQLPLAQFG LSFLHPVADA AHPFDDGTAA VLYSSLEKTA ELLGSDRQTY ERLFRPLLQD FKDLSEDILG PLQLPKHPLT MAKFGLKALP SAMHLAKRFK TREARGLFGG VAAHAIQPLT NIATSAIGLV LMANSHVSGW PAPKGGAQSL ANALGAYFTS LGGEIVTGNF VKALKELPPS KAVLLDVTPK QLLQIAGERF TSFYKWQLKR YKYGMGVFKV DWALDGPVPF TAAACREAGT IHLGNTIEEI ATNEQRTVDG QHPELPYTLF VQHSIFDKTR APEGKHTAWG YCHVPNGSTR DMTAAIENQV ERFAPGFKDL IIGRHVMNTA DVEAYNPNYI GGDINGGLLD ITQLYTRPAL RWSPYTTPAK GIYVCSSSTP PGGGIHGMCG YHAAKKALKD VFGVRL
|
| |