| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0327 |
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| Symbol | |
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| ID | 8356432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 381966 |
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| End bp | 386030 |
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| Gene Length | 4065 bp |
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| Protein Length | 1354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962473 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003120027 |
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| Protein GI | 256419374 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.19544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAATC ATTCCTTTTA CACTGAACAG TATCAATCAC TCGACGCCGA TGCCCGCATC
GTCGCAGACG TGCTGTCCGT ATACCTATAT CCCCTGGAAC GATATACGTT TCTCGATGCG
GTGAATCGCG TCAGGGAAAT ACCACAGGAC AGGATACTTG ATATCCTTGA ACTACTAAAG
GAAAAAGGAC TGGGAACCTA CAACCTGGCG GGCAATTATT CCCTGATACC AGAATTGGGT
TTCCTCCTGT TTCCGGAAAA TATCAGAAAG CCGGAATACC TGCGCCTGCT GGATCATGCA
AAACCATACT CATTTTACAG CACCAGCGCC CGCTTGCAGG AACTGCAACA ATTGCTGACC
GCCTTCTTTA CCGGCGATCG CTCCCTGTTA CTGCAACCTG TCAGAAAGAT CAGTTTTGAA
CTCGCAGAAT ACTTTCCCTA TCTCTGCTAT TTGCTGTACT ATCCCGAATA CGTAGGATTA
TTACGATTGT TCGATACCGG CAGCATTACC AGTATCTATC ACGCAGCCGT CCGGCAACAC
CTGCTGGCCA TGAGTACGCC TGATGCTTTG CAACAGCTCA AAGTACAGGT CGCCATATTG
ATCAGAACAG AACCGGGTGC ATTAGCACAT GCAGAAGTCA TCTTACAGGC CGGAGAAACA
GGAGAGGAGA TCACCGGTAC GGACGCTATT TATGCACAGG CTGCCGTACA TCTCTACGAA
GGGCAATCCG ACAAAGCCCT CACTGCATTT GAACAGGGTA TCAAACAACA ACGGCAACAG
GATAAAAAAC ATACCATTCC GGTATCGCCA CTCTTCGCCT TCCTGTACGC CTACACCCTG
ACGATACTAC CAGAAGAAAA AACATATACT ACTATTAACA AAGTAGTAGC TGCATACGAT
AAAAAACTCT TCCAGGATAT TACACCCGCC ATTGCGCTGT TACACTTTCA TAGCGGACGC
AAAGAAAAAG CGGATCACAT CCTGCAGATC CTGCTGGAAA CAACTTCTAA ACAGCCGGAA
AAATACCTGC TCAGTTACCT GGCCTTGATA TGTCTGCAGG CATATTACCC GAAAAGTAAA
CTGCTCAAAC AATATAGCCC TTTCCTGAAA GTCGTTTTAT ATCACGGTAT ACAACGCAAA
TACCGTCTGC TCACATACGA ACTCTTATAC CTGTTCCGTG AGCAGGCATA TCTGAATAAT
GAAAAGACTT TCCGCGAACT GGCCGCCTTC ATTGGTAAAG AGCCGATCTT TTCGCGGATG
CAGCCGGTCG CGGACTGGGA ACGCCTGCTC AACGTACTCA TCCTACCTGA AGCCGGCAAA
ACACAAAAAG AAAAGGCGCC AGCCGCTACA AGACTGGCTT ACCTGATTGA CATCCGTAAA
TCAGAAATCC AGCCTGTCAT ACAAACACAA GGAGATACCG GATGGAGTAG AGGCCGGCTA
GTAGAACTGA AAAAACTGAA GGATGGTCTG ATAGAAGCGA TGACGGATCA CGATACCCGT
ATTGCCGGCG CGATCATCAA AGAAAACTAT CATACCTATG GTACCGAAGC CTATGCCTTT
GGCGAAAGAG TATGGCATGA AATAACAGGT CATCCTTATC TGTTCATGCT GGATGCACCG
GAAACCCCTG TGGAGATTAT CAAGGGACAA CCGGAACTGG TGGTTAATAA AACAGGTAAC
GGCTACGAAT TCAGCACCAA TATCAACGAT TATATCAGCG ATACCGTACT GATAAAAGAA
TCAGATACAC GCCTGAAAGT GATCAGGCTT ACACAACAAC AACGTACCGT ATTACAGACG
CTCCGGCAAA TTGAAACAGT GCCTGCCACA GGAAAAGATA AACTGATGCA GGCGCTGCGC
AATATAGGCG CTCATATGAC GGTGCATTCC AACCTGGATG ACACCGCAGC ATTAAATATT
AAGCAACGGG CAGGCGACGC CCGTATACGC GTACAGCTGC AACCCACCGG CGATGCATTG
AGAGCCTCCT TCTTTGTAAA ACCGTTTGTC AATGATCCAC CTTATTGCAA ACCAGGAGAA
GGCGCCAAAC ACCTGATCGG CGTTACCAAT GGAGAACGTT GTCAGGCTAC CCGCGATCTC
GATGCAGAAA AGAGCAATCT GGAAAAACTC GTTACCCTTA TCCAGGAATC TGTCAAACAG
GAAATAGAAG ATGACGTCAT CATCTTCGAA GATCCTCTGG AATGCCTGCA ACTGCTGGAA
GTCATACAAC GTCACCCTGA ACTGGCCACT GCGGAATGGC CGGAAGGACA GAAATTACGG
GTACGTATGG TCGAACCACA GGCGCAACTC CGCCTGACCA TCCGCAGGGT AGATGGTAAA
TGGTTTGCTG CTAACGGCGA TCTCAAAGTG GACGAAGACA CGGTCTTATC CCTGAAAGAT
CTGCTGGACG CTGTGAAAGC CAGCAATAGC CGCTTTGTGA CAGTAGGAAA AGGGGAATTC
CTTTCGCTGA CCGGTAAACT CTACCGTCAG CTGAATGAAC TCGCCAGTGT AGCAATAGCA
GAACACGAAG AACTCCGTAT ACGTCCACTT GCTGCACACA TGCTGGACGA ACTACTGGAA
GGCGCCAGCC AGGTGGAAAC AGATGAACAC TGGAAAGCAC TGCGCGCCGG ACAGGCAGCG
GCAGCAACCG TACAGGCAGA AATCCCTGCT ACCTTACAAA CACAATTACG TCCTTACCAG
GAAGAAGGCT TCCGATGGAT GGCCAGACTG GCCGCATGGG GCGCAGGCGC CTGTCTCGCT
GATGACATGG GTCTGGGCAA AACGATCCAG GCAATCGCCA TGTTGTTATA TAGGGCACAT
GAAGGTCCGG CGCTGGTGGT ATGTCCGGCA TCCGTATTGC CGAACTGGGT AAACGAACTG
TATAAGTTCG CACCTTCTTT ACAAGTCAGA CAGATCGCCG GCAGTAAACG ACATGCCATA
CTGAAAGCAG CCGGTCCATT TGATGTAGTA CTGATCACCT ACGGTATCCT GCAATCCGAA
GATGAACTGC TATCCGTGAT TCCATGGAAC ACCGTCGTAC TGGATGAAGC GCATACCATT
AAAAACTACC AGACCAAAAC CTCCAAAGCT GCCATGGCTT TACAGGCTGG CTTCAGACTG
ATACTGACTG GTACCCCGGT ACAGAACCAC CTGACTGAGA TCTGGAACCT TTTCAACTTT
ATCAATCCCG GACTACTGGG TAGCCTGCCA TATTTTAATA AACAGTTTAC TACGCCGGTT
ATATATAACG CAGAAAGTAC TGTTACTAAA CACCTGCGTA AGATCGTCGC GCCATTCATG
CTACGTCGTA CCAAAACCGC CGTATTGGAT GAACTGCCGG AGAAAACAGA GATTGTGAAA
ATGATCTCCC TGTCGCCGGA AGAAGCGGCT TTCTATGAAG CACTTCGCCT GAAAGCAGTG
GAAAATATCA AACGTTATAG TAAAGACAAG ACCAGCAAGC ATAATTTAAA TACACTGACA
GAGATCGGGA AACTGCGCAT GGCAGCCTGT AATACACAGA TGATAGATCC GGAGATCCGG
ATACCTTCTT CCAAACTCGC TGTATTCATT GAAATCGTAA AAGAGCTGAT CGACAATAAT
CACCGCGCAC TGGTGTTTAG TCAGTACGTA AAACACCTCG ACCTGGTCAG GTTAGCCCTC
GATGAACTGA ATGTTTCCTA TTGCTACCTG GATGGCAGCA CTCCTATCCC CGTCAGGGAA
AGAGTCGTAA AAGAATTCCA GGCAGGCGCC GGTTCACTAT TCCTGATCAG TCTTAAAGCT
GGCGGAACTG GTCTGAACCT GACTGCCGCT GACTATGTCA TTCACTTGGA TCCCTGGTGG
AATCCTGCTA TTGAAGAACA GGCATCAGAT AGAGCATATC GTATCGGTCA GACAAGACCA
GTAACAATAT ACAGGCTGGT AACAAGACAC ACCATTGAAG AAAAGATCAT CGCACTCCAT
AATAGTAAAA GAGACCTGGC CGACAGACTT CTGGAAGGAA GCGACATCAG TGGTAAGTTA
TCCACGGATG AATTATTATC CCTGATTGCA AAAGCAGATA AATAA
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| Protein sequence | MVNHSFYTEQ YQSLDADARI VADVLSVYLY PLERYTFLDA VNRVREIPQD RILDILELLK
EKGLGTYNLA GNYSLIPELG FLLFPENIRK PEYLRLLDHA KPYSFYSTSA RLQELQQLLT
AFFTGDRSLL LQPVRKISFE LAEYFPYLCY LLYYPEYVGL LRLFDTGSIT SIYHAAVRQH
LLAMSTPDAL QQLKVQVAIL IRTEPGALAH AEVILQAGET GEEITGTDAI YAQAAVHLYE
GQSDKALTAF EQGIKQQRQQ DKKHTIPVSP LFAFLYAYTL TILPEEKTYT TINKVVAAYD
KKLFQDITPA IALLHFHSGR KEKADHILQI LLETTSKQPE KYLLSYLALI CLQAYYPKSK
LLKQYSPFLK VVLYHGIQRK YRLLTYELLY LFREQAYLNN EKTFRELAAF IGKEPIFSRM
QPVADWERLL NVLILPEAGK TQKEKAPAAT RLAYLIDIRK SEIQPVIQTQ GDTGWSRGRL
VELKKLKDGL IEAMTDHDTR IAGAIIKENY HTYGTEAYAF GERVWHEITG HPYLFMLDAP
ETPVEIIKGQ PELVVNKTGN GYEFSTNIND YISDTVLIKE SDTRLKVIRL TQQQRTVLQT
LRQIETVPAT GKDKLMQALR NIGAHMTVHS NLDDTAALNI KQRAGDARIR VQLQPTGDAL
RASFFVKPFV NDPPYCKPGE GAKHLIGVTN GERCQATRDL DAEKSNLEKL VTLIQESVKQ
EIEDDVIIFE DPLECLQLLE VIQRHPELAT AEWPEGQKLR VRMVEPQAQL RLTIRRVDGK
WFAANGDLKV DEDTVLSLKD LLDAVKASNS RFVTVGKGEF LSLTGKLYRQ LNELASVAIA
EHEELRIRPL AAHMLDELLE GASQVETDEH WKALRAGQAA AATVQAEIPA TLQTQLRPYQ
EEGFRWMARL AAWGAGACLA DDMGLGKTIQ AIAMLLYRAH EGPALVVCPA SVLPNWVNEL
YKFAPSLQVR QIAGSKRHAI LKAAGPFDVV LITYGILQSE DELLSVIPWN TVVLDEAHTI
KNYQTKTSKA AMALQAGFRL ILTGTPVQNH LTEIWNLFNF INPGLLGSLP YFNKQFTTPV
IYNAESTVTK HLRKIVAPFM LRRTKTAVLD ELPEKTEIVK MISLSPEEAA FYEALRLKAV
ENIKRYSKDK TSKHNLNTLT EIGKLRMAAC NTQMIDPEIR IPSSKLAVFI EIVKELIDNN
HRALVFSQYV KHLDLVRLAL DELNVSYCYL DGSTPIPVRE RVVKEFQAGA GSLFLISLKA
GGTGLNLTAA DYVIHLDPWW NPAIEEQASD RAYRIGQTRP VTIYRLVTRH TIEEKIIALH
NSKRDLADRL LEGSDISGKL STDELLSLIA KADK
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