| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0325 |
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| Symbol | |
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| ID | 8356430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 375262 |
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| End bp | 381375 |
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| Gene Length | 6114 bp |
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| Protein Length | 2037 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962471 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003120025 |
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| Protein GI | 256419372 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC GGAGAAAAAA TCCCGATAGT ACTGCCCTGT CCAAGAAAGA TGTGGAAAAG
ACTCCACAGA CTTCCACAAC AAAGCGCAGC AAAGAAACCA AGCAAGTATA CGCACCCGTA
GCAGATGAAC TGGATTTGCG GCAATTGTTG CAGGTCCTGC TGGACGTTAG AAGTGGCAAT
TTCTCCACAA GGATGTCGGC GGATAATATC GGGTTAAGTG GCAAAATCTG TGACACGCTT
AATGAGATTA TTTCCCTGAA CGAAACCCTG GTGGAGGAAC TGACGCTGGC GAGGAATACC
ATCGGAAAGA TGGGACGTCT GAATCACCGT GTGGTCATGC CCCGTACTGC AAAGGGCTCC
TGGGATAATG CGGTTGCTTC TATCAATACA CTGATCTCTG ATCTTGTTCA TCCTACCATC
GAAATAGCAC ACGTAATCAG TTCTGTGGCG AAGGGGAATC TTTCGCAGGA AATGCCTTTG
CAGATCGAAG ATCACGTGTT GCAGGGGGAA TTTGCCCGTA TTGCGACGGA GGTGAACGGG
ATGGTGAAAC AGCTGAACCT CTTCTCACGT GAGGTGACGC GTGTGGCGCG TGAGGTGGGA
TCCGAAGGTA AGTTGGGCGG ACAAGCGAAA GTAAAAGATG TGGCTGGTGT ATGGAAAGAC
CTGACGGACT CCGTAAACCA GATGGCGGGT AACCTGACGG CGCAGGTGCG TAACATCGCG
GATGTAACGA CGGCGGTGGC AAAAGGTGAC CTGTCCAAGA AAATTACAGT GGATGTACAA
GGAGAGATCC TTGAGCTGAA AGATACAATC AATACGATGG TGGATCAGCT GAACTCCTTC
TCCTCCGAGG TGACGCGTGT GGCCCGTGAG GTAGGTACGG ATGGTAAGCT GGGTGGCCAG
GCAGAGGTAA AAGGTGTGGC AGGTACCTGG AAGGATCTGA CGGATTCTGT GAATCAGATG
GCGTCCAACC TGACAGGTCA GGTGCGAAAC ATCGCAGAGG TAACAACGGC GGTGGCGAGA
GGTGACCTGT CCCGTAAAAT TACCGTGGAC GTACGCGGGG AGATCCTGGA GCTGAAAAAC
ACCATGAATA CAATGGTGGA CCAGCTGAAC TCCTTCTCTG TAGAGGTAAC GCGTGTGGCG
CGTGAGGTAG GTTCTGAGGG TAAACTGGGT GGTCAGGCAA CGGTAAAAGG TGTCGGTGGT
GTGTGGAAAG ACCTGACAGA TTCCGTAAAC CAGATGGCGG GTAACCTGAC GGCGCAGGTA
CGTAACATCG CAGACGTAAC GACGGCGGTG GCAAAAGGTG ACCTGTCGCG TAAGATCACG
GTGGATGTAA AGGGAGAAAT CCTGGAGTTG AAAAATACCA TTAATACAAT GGTGGACCAG
CTGAACTCCT TTGCTTCCGA GGTGACCCGT GTGGCTCTTG AGGTGGGTAC GGAAGGTAAG
CTGGGTGGTC AGGCGAAAGT GCAGGGTGTG GGTGGTACCT GGAAGGATCT GACCGATTCG
GTAAACCAGA TGGGATCCAA CCTGACGGCA CAGGTGCGAA ACATTGCGGA AGTAACGACC
GCGGTGGCGA ATGGTGACCT GTCAAAGAAG ATTACGGTAA ACGTAGAGGG TGAGATCCTT
GAACTGAAAA AGACGATCAA TACGATGGTG GATCAGCTGA ACTCCTTCGC CTCTGAGGTG
ACCCGTGTGG CCCTTGAGGT GGGTACGGAA GGTAAGCTGG GTGGCCAGGC GAAAGTGCAG
GGTGTGGGTG GTACCTGGAA GGATCTGACC GAGTCGGTGA ACCAGATGGG ATCCAACCTG
ACCGCGCAGG TGCGTAATAT CGCGGAAGTA ACAACGGCGG TGGCGAAAGG TGACCTGTCG
CGTAAGATCA CGGTGGACGT AAAGGGAGAG ATCCTTGAGT TAAAAAATAC CATCAATACA
ATGGTGGACC AGCTGAACTC CTTCGGTTCG GAGGTGTTCC GTGTGGCGCG TGAGGTAGGT
TCTGAGGGTA AACTGGGCGG ACAGGCCGAT GTACCGGGTG TGGAAGGTCT CTGGAAAGAC
CTGACGGACT CCGTGAATAT CATGGCGTCC AACCTGACGT CGCAGGTACG TAACATCGCA
GAGGTAACAA CGGCGGTGGC AAACGGTGAC CTGTCGCGTA AAATTGAAGT AGACGTTAAG
GGAGAGATCC TTGAACTGAA AAATACCATC AATACGATGG TGGAACAGCT GCGCGCATTC
GCTTCTGAGG TAACGCGTGT GGCCCGTGAG GTAGGTACGG ATGGTAAACT GGGTGGTCAG
GCGTTCGTAC CGGGCGTCGG TGGTACCTGG AAAGACCTGA CGGATTCGGT GAACCAGATG
GCGGGTAACC TGACGGCACA GGTGCGAAAC ATTGCGGATG TGGCGATTGC GGTGGCGAAC
GGTGACATGT CCCGTAAGAT TACGGTGGAC GTACGTGGCG AGATCCTGCA GCTGAAAGAA
ACGCTGAATA CGATGGTGGA TCAGCTGCGT GCATTCGCTT CTGAGGTAAC GCGTGTGGCC
CGTGAGGTGG GTACGGATGG TAAACTGGGT GGTCAGGCAT TCGTACCGGG TGTCGCTGGT
ACCTGGAAGG ATCTGACGGA CTCCGTAAAC CAGATGACGG GTAACCTGAC ATCACAGGTA
CGTAACATCG CCGAGGTAAC GAAAGCGGTG GCATCGGGTG ACCTTTCCAA AAAAGTAACG
ATCGACGTAA AAGGAGAAAT CCTTGATCTG AAAAACACCA TCAATACGAT GGTGGACCAG
CTGAACTCCT TCGCTTTTGA GGTGACCCGT GTGGCCCGTG AGGTAGGTAC GGAAGGTAAG
CTGGGTGGTC AGGCGGAAGT ACAGGGTGTG GGTGGTACCT GGAAAGACCT GACAGACTCT
GTGAACATGA TGGCCTCCAA CCTGACGAAC CAGGTGCGTG GAATCGCGAA AGTGGTAACG
GCGGTGGCGA CGGGTAATCT GAAACAGAAA CTCTCCATCG TATCGCGCGG TGAGGTAGCA
CAGCTGACTG AGACGATCAA CGAAATGATC GATACACTGG CATTGTTTGC CGACCAGGTA
ACAACGGTGG CCCGTGAGGT GGGAGTTGAA GGTAGATTGG GTGGTCAGGC GAGTGTGCCA
GGTGCATCCG GTATCTGGAA AAACCTGACG GAAAACGTAA ACCAGCTAGC GGAAAACCTT
ACCACACAGG TACGTGCGAT TTCGGCGGTG GCATCGGCGG TAACGAAAGG TGACCTGACT
CAGATGATCC GTGTGGAAGC GAAGGGTGAG GTAGAAGAGC TGAAAGATAC CATCAACCAG
ATGATCGCCA ACCTGAAACA GACGACCCTG CGTAACCAGG AACAGGACTG GCTAAAATCC
AACCTGGCGA AATTCACGCA GATGCTGCAA GGGCAGAAAG ACCTGAATAC GGTAACCCGC
CGTATCCTCT CAGAGCTGGC CCAGGTGGTA AATGCACAGA AAGGGATGTT CTATATTCTG
GAACAGGAAG AGAACCTGCT GAATCCAAAA CTCAAATTAT TTGCAGCATA TGCATATGGC
AACGAGGTGA GCGTATCCCG CGAGTTTGCA CTCGGACAGG GACTTGTAGG TCAGTGTGCC
GTAGAAAAAG AACGTATCCT GCTGACCAAC GTACCGTCAA ATTATATTAA GATCAGCTCC
GGACTGGGTG AAGCCACACC GGTTAACCTG ATCGTATTGC CGGTATTGTT TGAGCAGGAG
ATCAAAGCGG TGATAGAACT GGCATCCTTC GATACCTTTA GCCAAACGCA CTTAGACTTC
CTGAGTCAGT TGACAGAAAG TATCGGTATC GTACTGAACA CGATCGAGGC GAACTCCAGA
ACAGAGGACC TGCTGGAGCA GTCCCAGTCA TTGGCGGATG AGCTGAGAAG AACGAACGAA
GAACTCCAGG ATAAAGCGCA CCTGCTGGTG AAACAGAAGG ATGAGGTGGA AGAGAAGAAC
AAGGAGGTGG AAGAAGCAAG AAGATCACTG GAAGAAAAAG CAGAACAGTT ACAGCTGACA
TCTAAGTATA AATCAGAGTT CCTGGCGAAC ATGTCGCACG AGTTGCGTAC ACCGCTGAAC
TCATTACTGA TATTGGCGCA ACAGCTCTAT GAAAACCATG ATGGTAACCT GAATGAGAAA
CAGGTACGTT ATGCGAAAAC CATCCATAGC TGTGGTGATG ACCTTATCCA ACTGATCAAC
GACATCCTCG ACCTGTCGAA GATCGAATCT GGTTATATTT CTACAGACTT TATCAAGGTA
CGTTTCAACG AGGTGGTATC TTTTGTGGAA ACGACCTTCA AACATATCTC TGAAAGTAAG
AGTCTGCGCT TCCGTATTGA AATGGATGAA CAGCTGCCAC AGTCGCTGGA AACGGACGTA
CAGCGTCTCA ACCAGATTCT GAAAAACCTG TTGTCAAATG CGTTCAAATT CACAGAAAAA
GGAGAAGTAA AACTCCGGAT CTATGAAGCG AAACGTAACT GGCGACTGAT GAATGGTAGT
CTCGACAGTG CGGACAGAGT GGTTGCATTT GAAATCAGGG ATACAGGCAT TGGTATTTCC
AAAGACAAGC AGAATATCAT TTTCGAAGCC TTCCAGCAGG CAGAAGGTTC CACCAGCCGT
AAGTATGGCG GTACTGGTCT GGGACTGTCT ATCAGCCGTG GTCTGGCAGA CCTCCTGGGT
GGTTCTATCG AATTGGAAAG CGAGGTTGGA AGAGGTAGTA TCTTCACTTT GTTCCTGCCA
TTGCAGTACA ATCCGGCTGC TATCAAACGC GAAAAACAGA GTAGTCTGAC CGTAGGACAA
TACCAGTTGC CTGAAAGCTA TGAGCCTGCC CTGGTACAAC CTATGGCTAT TACACAGACG
AAACTTCCTG AGACGCTGGA AGGCCTGAAT GAGATCATCA ACGAAATAGG CGACGACAGA
ACCCATATTA TTGAATCAGA CAAGGTCGTA CTGATCGTCG AAGATGACGT ACGTTTTGCT
AAGATCATGC TGGAGAAGGC GCATGAGATG GGACTGAAAG TAGTGGTAGC GACCAGTTTC
GGAGATGTGT TCGATCTGAC CAACAAGTAT AATCCGATTG CCGTTACACT GGATGTAAAG
TTGCCGGATG CGAGTGGCTG GAGAGTACTT GATCTGTTCA AAAACGATAT TAATTTAAGA
CATATCCCCA TCCACCTGAT ATCCGGAGAA GAGAACCGTT TGCTGGCGAT GCATCGTGGT
GCAAGAAGTT TCAATCTGAA GCCACTGAAA GCAGAAGCGC TGAATATATT GTTCACCAGT
ATCATGGAGC ATGATAGTCG CAAGACGAAG AAAGTGCTTG TGGTGGAAGA CAATGAACCT
GATGCATCAC AGATCGCGCG TATCCTGGAT AATGGAGAGC TGATTGAGAT GGATTTTGTT
GAAAATGGTA AAGCGGCTAT TGATAAGGTG AATAGTACAG CATATGATTG TATCATTGCA
GACTATATGT TGCCGGATAT CGATGGTGCT GAGTTTGTAG CGAACATGAA TACGGTCAAC
AGGCATAACG CTACACCGGT GATCGTATAC TCGGCGAAGG ACTTTACCAA CAATGAGCGG
TCGAAACTAA AGCAGTATGC CAATAAAATA CTGCTGAAAG GCGTTAACTC ATTGGATCTG
TTGCTGGAAG AGACGATCAT GCAGCTGCAT ATCAATCATC AGTTCCTGGC GCCGGAGAAG
AAGAAGCTGA TCGAAGATCT GCGTTCACAG AAAGATGTAT TGATCCATAA AAATGTGCTG
GTAGTCGATG ATGACGTACG TAACCTGTTT GCACTGACCA CCGCTTTCGA GCGTTTCCAT
ATCAATACCA TTACAGCGGA AAGTGGTAAG GAAGCCATGA ATATCCTGAG TGAGAATAGT
GATATTGATA TTGTACTGAT GGATATTATG ATGCCTGAGA TGGATGGTTA TGAGACGATG
CAGAAGATCA GAAGGGAGCA TAAGAACAGT GCATTGCCTA TTATTGCAGT TACGGCTAAA
GCGATGAAGG GTGACAGGGA GAAGTGTCTT GAAGCCGGAG CTTCTGATTA TATTACAAAA
CCGTTAAAAA TAGATCAGTT ATTATCGTTG ATGCGGGTAT GGTTGTATAG ATAG
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| Protein sequence | MNTRRKNPDS TALSKKDVEK TPQTSTTKRS KETKQVYAPV ADELDLRQLL QVLLDVRSGN
FSTRMSADNI GLSGKICDTL NEIISLNETL VEELTLARNT IGKMGRLNHR VVMPRTAKGS
WDNAVASINT LISDLVHPTI EIAHVISSVA KGNLSQEMPL QIEDHVLQGE FARIATEVNG
MVKQLNLFSR EVTRVAREVG SEGKLGGQAK VKDVAGVWKD LTDSVNQMAG NLTAQVRNIA
DVTTAVAKGD LSKKITVDVQ GEILELKDTI NTMVDQLNSF SSEVTRVARE VGTDGKLGGQ
AEVKGVAGTW KDLTDSVNQM ASNLTGQVRN IAEVTTAVAR GDLSRKITVD VRGEILELKN
TMNTMVDQLN SFSVEVTRVA REVGSEGKLG GQATVKGVGG VWKDLTDSVN QMAGNLTAQV
RNIADVTTAV AKGDLSRKIT VDVKGEILEL KNTINTMVDQ LNSFASEVTR VALEVGTEGK
LGGQAKVQGV GGTWKDLTDS VNQMGSNLTA QVRNIAEVTT AVANGDLSKK ITVNVEGEIL
ELKKTINTMV DQLNSFASEV TRVALEVGTE GKLGGQAKVQ GVGGTWKDLT ESVNQMGSNL
TAQVRNIAEV TTAVAKGDLS RKITVDVKGE ILELKNTINT MVDQLNSFGS EVFRVAREVG
SEGKLGGQAD VPGVEGLWKD LTDSVNIMAS NLTSQVRNIA EVTTAVANGD LSRKIEVDVK
GEILELKNTI NTMVEQLRAF ASEVTRVARE VGTDGKLGGQ AFVPGVGGTW KDLTDSVNQM
AGNLTAQVRN IADVAIAVAN GDMSRKITVD VRGEILQLKE TLNTMVDQLR AFASEVTRVA
REVGTDGKLG GQAFVPGVAG TWKDLTDSVN QMTGNLTSQV RNIAEVTKAV ASGDLSKKVT
IDVKGEILDL KNTINTMVDQ LNSFAFEVTR VAREVGTEGK LGGQAEVQGV GGTWKDLTDS
VNMMASNLTN QVRGIAKVVT AVATGNLKQK LSIVSRGEVA QLTETINEMI DTLALFADQV
TTVAREVGVE GRLGGQASVP GASGIWKNLT ENVNQLAENL TTQVRAISAV ASAVTKGDLT
QMIRVEAKGE VEELKDTINQ MIANLKQTTL RNQEQDWLKS NLAKFTQMLQ GQKDLNTVTR
RILSELAQVV NAQKGMFYIL EQEENLLNPK LKLFAAYAYG NEVSVSREFA LGQGLVGQCA
VEKERILLTN VPSNYIKISS GLGEATPVNL IVLPVLFEQE IKAVIELASF DTFSQTHLDF
LSQLTESIGI VLNTIEANSR TEDLLEQSQS LADELRRTNE ELQDKAHLLV KQKDEVEEKN
KEVEEARRSL EEKAEQLQLT SKYKSEFLAN MSHELRTPLN SLLILAQQLY ENHDGNLNEK
QVRYAKTIHS CGDDLIQLIN DILDLSKIES GYISTDFIKV RFNEVVSFVE TTFKHISESK
SLRFRIEMDE QLPQSLETDV QRLNQILKNL LSNAFKFTEK GEVKLRIYEA KRNWRLMNGS
LDSADRVVAF EIRDTGIGIS KDKQNIIFEA FQQAEGSTSR KYGGTGLGLS ISRGLADLLG
GSIELESEVG RGSIFTLFLP LQYNPAAIKR EKQSSLTVGQ YQLPESYEPA LVQPMAITQT
KLPETLEGLN EIINEIGDDR THIIESDKVV LIVEDDVRFA KIMLEKAHEM GLKVVVATSF
GDVFDLTNKY NPIAVTLDVK LPDASGWRVL DLFKNDINLR HIPIHLISGE ENRLLAMHRG
ARSFNLKPLK AEALNILFTS IMEHDSRKTK KVLVVEDNEP DASQIARILD NGELIEMDFV
ENGKAAIDKV NSTAYDCIIA DYMLPDIDGA EFVANMNTVN RHNATPVIVY SAKDFTNNER
SKLKQYANKI LLKGVNSLDL LLEETIMQLH INHQFLAPEK KKLIEDLRSQ KDVLIHKNVL
VVDDDVRNLF ALTTAFERFH INTITAESGK EAMNILSENS DIDIVLMDIM MPEMDGYETM
QKIRREHKNS ALPIIAVTAK AMKGDREKCL EAGASDYITK PLKIDQLLSL MRVWLYR
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