Gene Cpin_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0317 
Symbol 
ID8356422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp364808 
End bp366748 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content49% 
IMG OID644962463 
Productband 7 protein 
Protein accessionYP_003120017 
Protein GI256419364 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAT CTGAAGTGAT CAGGTGGCTG ATCATGATCG GCCTGCCCAT CCTATGTCTT 
GTATTTTACA AGTACATTCT TCGCGTCTTC TTCGGTCTTG TAATCGTACC GGAAGACAAG
ATCGGTCTTG TGACCAAAAA ATTCGTGCTG ATGGGTAAAC AGGAGCTGCC CGAAGGACGT
ATCATCGCTA CCGGCGGGGA AGCGGGTTTT CAGGCCCAGA CACTGGCTCC CGGTGTATAC
TTCTGGAAAT GGTTCTGGCA GTATGAAGTA ACCTTCCAGT CCTTCACCAT CATCCCTACC
GGTAAAATCG GTCTGGTACT GGCAAAAGAC GGTACCCCAC TCAATCCGGG TGCTATTCTT
GCCCGTCGTG TAGAAAGCGA CGCCTATCAG AACGCAGAGG CATTCCTGAA CAATGGCGGT
CAGAAGGGTC GTCAGACAGC CATTATGACG CCTGGTTCTT ACCGTGTGAA CACCTTCCTG
TTCGAAGTGG AAATCACTGA TATGACCACC GTACCTGACA ACACGGTCGC TATCGTAACC
ACCCTTGAAG GGCAGGCTAT CGAAAATGGT CAGATCGCCG GTAAGATCAT TCAGAACCAT
AACAACTTCC AGGATGCAGA CGCCTTCCTG AGCAATGGTG GGTATAAAGG TTTGCAGGAG
CAGGTAATCC TTGCCGGTTC TTACTTCCTC AACCCATGGT TTGCCAAGGT GGAAATGCGT
CAGATGACGG AAATCCCGAT CAGCCATGTG GGTGTTGTCA TCTCTTATGT AGGTAACGAA
GGTGAAGACA TCAGCGGTAC CGAATTCAAA CACGGTAATA TCGTCGCAAA AAACCATAAA
GGGGTATGGG CAGAACCACT AGGACCGGGT AAGTATCCGA TCAACTCCTA CATCATGAAG
GTGGAATATG TACCAACAAC CAACCTGGTG TTAAACTGGG CCTCCGCCCG CAGTGAAGCG
CACCAGCTGG ATAAAAACCT TTCTACCATA ACAGTACGTA GTAAGGACGG TTTTACCTTC
AACCTGGATG TCGCACAGAT CATCCACATC CCTTCTAATG AAGCGCCTAA GGTGATCGCA
CGTTTCGGTA ACATGAGCAA CCTGGTAACA CAGGTATTGG AACCAACAAT CGGTAACTAC
TTCCGTAACT CCGCGCAGGA TGCTGAGGTG ATCGACTTCC TGAAGAGCCG TAAGGAACGT
CAGGAATCTG CGAAAGCACA TATCGGAAGA GTGCTGGAAC AATACAACGT ATTCGGTGTG
GATACCCTTA TAGGTGACAT CGTTCCACCG GAAAGTCTGA TGAAAACACT GACTGACCGT
AAATTGGCGG AAGAACAGAA AGTAACTTAC GACACCCAGA TGCGTGCACA GGAAACAAGG
CAGGCACTGG AAAAAGAAAC CGCGATCGCC GAAATCCAGA AGGAGATCGT AAAAGCCGAC
CAGGGTGTAT TGATCGCAGA AAGGATTGCC GACGCTGCGG TGAAAAAAGC AACGGGTGAC
GCGAACAGCG TACGTCTGCA GGCAAACGCG GAAGCTGACA GAATGAAACT GATGGCAAGT
GGTGAGGCGG AAAAAGTACG TGTACTTGCG AAGGCAGAAG CAGAAAGAAC GGAACTGATC
GCAAAAGCGG ACGCAGAAAA GATCTCCCTC ACAGGTAACG CGGAAGCGGA AAAAATCCTG
GCGATCGGTA AGTCAAGCGC CGAGTCTTAT AAACTGGCGG TAGAAGCGAT GGGTGGTAAC
AACTTTACGC AATTGAAGGT AATGGAAGCC ATCGGTCAAC AACATATCAA GATCATGCCT
GATATTCTTA TCGGTGGTGG CGGCGATAGT ACCAACGGTC CGATCGGCGG ATTACTCGGT
CTCAGACTGC TGGAACAACT GGGCAACAAA CAAACAACTG AAGCACAAAC AGACAAAGCG
GAATCCGCTG AAAATAAATA A
 
Protein sequence
MQSSEVIRWL IMIGLPILCL VFYKYILRVF FGLVIVPEDK IGLVTKKFVL MGKQELPEGR 
IIATGGEAGF QAQTLAPGVY FWKWFWQYEV TFQSFTIIPT GKIGLVLAKD GTPLNPGAIL
ARRVESDAYQ NAEAFLNNGG QKGRQTAIMT PGSYRVNTFL FEVEITDMTT VPDNTVAIVT
TLEGQAIENG QIAGKIIQNH NNFQDADAFL SNGGYKGLQE QVILAGSYFL NPWFAKVEMR
QMTEIPISHV GVVISYVGNE GEDISGTEFK HGNIVAKNHK GVWAEPLGPG KYPINSYIMK
VEYVPTTNLV LNWASARSEA HQLDKNLSTI TVRSKDGFTF NLDVAQIIHI PSNEAPKVIA
RFGNMSNLVT QVLEPTIGNY FRNSAQDAEV IDFLKSRKER QESAKAHIGR VLEQYNVFGV
DTLIGDIVPP ESLMKTLTDR KLAEEQKVTY DTQMRAQETR QALEKETAIA EIQKEIVKAD
QGVLIAERIA DAAVKKATGD ANSVRLQANA EADRMKLMAS GEAEKVRVLA KAEAERTELI
AKADAEKISL TGNAEAEKIL AIGKSSAESY KLAVEAMGGN NFTQLKVMEA IGQQHIKIMP
DILIGGGGDS TNGPIGGLLG LRLLEQLGNK QTTEAQTDKA ESAENK