Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0317 |
Symbol | |
ID | 8356422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 364808 |
End bp | 366748 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962463 |
Product | band 7 protein |
Protein accession | YP_003120017 |
Protein GI | 256419364 |
COG category | [S] Function unknown |
COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCAT CTGAAGTGAT CAGGTGGCTG ATCATGATCG GCCTGCCCAT CCTATGTCTT GTATTTTACA AGTACATTCT TCGCGTCTTC TTCGGTCTTG TAATCGTACC GGAAGACAAG ATCGGTCTTG TGACCAAAAA ATTCGTGCTG ATGGGTAAAC AGGAGCTGCC CGAAGGACGT ATCATCGCTA CCGGCGGGGA AGCGGGTTTT CAGGCCCAGA CACTGGCTCC CGGTGTATAC TTCTGGAAAT GGTTCTGGCA GTATGAAGTA ACCTTCCAGT CCTTCACCAT CATCCCTACC GGTAAAATCG GTCTGGTACT GGCAAAAGAC GGTACCCCAC TCAATCCGGG TGCTATTCTT GCCCGTCGTG TAGAAAGCGA CGCCTATCAG AACGCAGAGG CATTCCTGAA CAATGGCGGT CAGAAGGGTC GTCAGACAGC CATTATGACG CCTGGTTCTT ACCGTGTGAA CACCTTCCTG TTCGAAGTGG AAATCACTGA TATGACCACC GTACCTGACA ACACGGTCGC TATCGTAACC ACCCTTGAAG GGCAGGCTAT CGAAAATGGT CAGATCGCCG GTAAGATCAT TCAGAACCAT AACAACTTCC AGGATGCAGA CGCCTTCCTG AGCAATGGTG GGTATAAAGG TTTGCAGGAG CAGGTAATCC TTGCCGGTTC TTACTTCCTC AACCCATGGT TTGCCAAGGT GGAAATGCGT CAGATGACGG AAATCCCGAT CAGCCATGTG GGTGTTGTCA TCTCTTATGT AGGTAACGAA GGTGAAGACA TCAGCGGTAC CGAATTCAAA CACGGTAATA TCGTCGCAAA AAACCATAAA GGGGTATGGG CAGAACCACT AGGACCGGGT AAGTATCCGA TCAACTCCTA CATCATGAAG GTGGAATATG TACCAACAAC CAACCTGGTG TTAAACTGGG CCTCCGCCCG CAGTGAAGCG CACCAGCTGG ATAAAAACCT TTCTACCATA ACAGTACGTA GTAAGGACGG TTTTACCTTC AACCTGGATG TCGCACAGAT CATCCACATC CCTTCTAATG AAGCGCCTAA GGTGATCGCA CGTTTCGGTA ACATGAGCAA CCTGGTAACA CAGGTATTGG AACCAACAAT CGGTAACTAC TTCCGTAACT CCGCGCAGGA TGCTGAGGTG ATCGACTTCC TGAAGAGCCG TAAGGAACGT CAGGAATCTG CGAAAGCACA TATCGGAAGA GTGCTGGAAC AATACAACGT ATTCGGTGTG GATACCCTTA TAGGTGACAT CGTTCCACCG GAAAGTCTGA TGAAAACACT GACTGACCGT AAATTGGCGG AAGAACAGAA AGTAACTTAC GACACCCAGA TGCGTGCACA GGAAACAAGG CAGGCACTGG AAAAAGAAAC CGCGATCGCC GAAATCCAGA AGGAGATCGT AAAAGCCGAC CAGGGTGTAT TGATCGCAGA AAGGATTGCC GACGCTGCGG TGAAAAAAGC AACGGGTGAC GCGAACAGCG TACGTCTGCA GGCAAACGCG GAAGCTGACA GAATGAAACT GATGGCAAGT GGTGAGGCGG AAAAAGTACG TGTACTTGCG AAGGCAGAAG CAGAAAGAAC GGAACTGATC GCAAAAGCGG ACGCAGAAAA GATCTCCCTC ACAGGTAACG CGGAAGCGGA AAAAATCCTG GCGATCGGTA AGTCAAGCGC CGAGTCTTAT AAACTGGCGG TAGAAGCGAT GGGTGGTAAC AACTTTACGC AATTGAAGGT AATGGAAGCC ATCGGTCAAC AACATATCAA GATCATGCCT GATATTCTTA TCGGTGGTGG CGGCGATAGT ACCAACGGTC CGATCGGCGG ATTACTCGGT CTCAGACTGC TGGAACAACT GGGCAACAAA CAAACAACTG AAGCACAAAC AGACAAAGCG GAATCCGCTG AAAATAAATA A
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Protein sequence | MQSSEVIRWL IMIGLPILCL VFYKYILRVF FGLVIVPEDK IGLVTKKFVL MGKQELPEGR IIATGGEAGF QAQTLAPGVY FWKWFWQYEV TFQSFTIIPT GKIGLVLAKD GTPLNPGAIL ARRVESDAYQ NAEAFLNNGG QKGRQTAIMT PGSYRVNTFL FEVEITDMTT VPDNTVAIVT TLEGQAIENG QIAGKIIQNH NNFQDADAFL SNGGYKGLQE QVILAGSYFL NPWFAKVEMR QMTEIPISHV GVVISYVGNE GEDISGTEFK HGNIVAKNHK GVWAEPLGPG KYPINSYIMK VEYVPTTNLV LNWASARSEA HQLDKNLSTI TVRSKDGFTF NLDVAQIIHI PSNEAPKVIA RFGNMSNLVT QVLEPTIGNY FRNSAQDAEV IDFLKSRKER QESAKAHIGR VLEQYNVFGV DTLIGDIVPP ESLMKTLTDR KLAEEQKVTY DTQMRAQETR QALEKETAIA EIQKEIVKAD QGVLIAERIA DAAVKKATGD ANSVRLQANA EADRMKLMAS GEAEKVRVLA KAEAERTELI AKADAEKISL TGNAEAEKIL AIGKSSAESY KLAVEAMGGN NFTQLKVMEA IGQQHIKIMP DILIGGGGDS TNGPIGGLLG LRLLEQLGNK QTTEAQTDKA ESAENK
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