Gene Cpin_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0313 
Symbol 
ID8356418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp358372 
End bp359598 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content49% 
IMG OID644962459 
Producthypothetical protein 
Protein accessionYP_003120013 
Protein GI256419360 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GACTGTTTTA TGTATCCTTA CTGATCATAT CCTGTATCCT TATATTTTCC 
CGATGTGTCC GTAAGGCGCC GGAAAGTAAC AGCGCTGATA TCAGGGGAAA AGAGTTTGCC
GGAGCGACCA CCTGTGCGAA TTGCCACCGT CAGATTTACG ACTCCTATAT GCATACAGGA
CACTTTAATA CTTCTGCTCC TGCATCCGCT GGAACGATCA AAGGCAGTTT CGCCGCCAAT
GGCAATAGCT TTTCCTATAG CAACGGGATC CGGGTAGCTA TGGAGCGCCG GGACAGTGGC
TTATTCCAGA CGGCCTATGC GGACAGTACT TTACAGGAGA TACACCGTTT TGACATTACC
ATAGGATCGG GTAGAAAAGC GCAGACTTTT CTGACCTGGA GTGCCGGCAG GTATTTTCAG
TTACCGCTTT CCTGGTTTGT GCCAGCTGAC AGCTGGGCGA ATAGTCCTGG TTTTCCTCCC
TCCTATCCAA AGTTTGACCG GATGATACCC AGTACCTGTT TTGGGTGTCA CAGCTCCGCT
GTAGGCATTA AAGACGTGCA TATGGAAGGA CGGCATCTGT CAGAGGAGTT TGAAAAGAAT
CAGCTGGTAT ACGGTATTGA CTGTGAACGC TGTCATGGGC CTGCTGCTGC ACATGTGGCT
TTTCATACTT CCCATCCGCA GGAGAAAAAT CCCATGCATA TTACAAAGGT CCGTTCCTTA
CAACACCAGC AGCGACTGGA TATGTGTGCT TTGTGCCATT CCGGTTTAGG AACGCCGCAA
AAGCCCGCTT TTGCCTATAA GCCCGGAGAT GCCTTGTCAG ATTATTTCTT CCCTGACTTT
ACCCGTCCTA CCCGGGCTGC CGAACTGGAT GTACATGGGA AGCAATACCA GTTGTTCACC
GCCAGTAAAT GTTTTGTGAA AAGTAATGAT ATGACCTGTT CTACCTGTCA TAATCCGCAT
AATAGTGAGC GCAATCAGCT GGCGACATTT TCACAGCGTT GTATGAGCTG TCATCAGGCA
GGGCAGCCTA CTTTCTGTAA ATTGGAAAAT ATATCGGCGG AAGTGTTGTC GAAGAATTGT
ATTGATTGTC ATATGCCGGC CCTGGCATCC GGTAAGATCA CGCTGCTGAC CAACGGAGAG
AACAGTCCTA CGCCTGATTC CATGCGTACG CACCTCATTA CGGTATATCC TGAAGAAGCA
AAACGGGTAT TGGCCCGGTT TAAATAG
 
Protein sequence
MNKRLFYVSL LIISCILIFS RCVRKAPESN SADIRGKEFA GATTCANCHR QIYDSYMHTG 
HFNTSAPASA GTIKGSFAAN GNSFSYSNGI RVAMERRDSG LFQTAYADST LQEIHRFDIT
IGSGRKAQTF LTWSAGRYFQ LPLSWFVPAD SWANSPGFPP SYPKFDRMIP STCFGCHSSA
VGIKDVHMEG RHLSEEFEKN QLVYGIDCER CHGPAAAHVA FHTSHPQEKN PMHITKVRSL
QHQQRLDMCA LCHSGLGTPQ KPAFAYKPGD ALSDYFFPDF TRPTRAAELD VHGKQYQLFT
ASKCFVKSND MTCSTCHNPH NSERNQLATF SQRCMSCHQA GQPTFCKLEN ISAEVLSKNC
IDCHMPALAS GKITLLTNGE NSPTPDSMRT HLITVYPEEA KRVLARFK