Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0313 |
Symbol | |
ID | 8356418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 358372 |
End bp | 359598 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962459 |
Product | hypothetical protein |
Protein accession | YP_003120013 |
Protein GI | 256419360 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC GACTGTTTTA TGTATCCTTA CTGATCATAT CCTGTATCCT TATATTTTCC CGATGTGTCC GTAAGGCGCC GGAAAGTAAC AGCGCTGATA TCAGGGGAAA AGAGTTTGCC GGAGCGACCA CCTGTGCGAA TTGCCACCGT CAGATTTACG ACTCCTATAT GCATACAGGA CACTTTAATA CTTCTGCTCC TGCATCCGCT GGAACGATCA AAGGCAGTTT CGCCGCCAAT GGCAATAGCT TTTCCTATAG CAACGGGATC CGGGTAGCTA TGGAGCGCCG GGACAGTGGC TTATTCCAGA CGGCCTATGC GGACAGTACT TTACAGGAGA TACACCGTTT TGACATTACC ATAGGATCGG GTAGAAAAGC GCAGACTTTT CTGACCTGGA GTGCCGGCAG GTATTTTCAG TTACCGCTTT CCTGGTTTGT GCCAGCTGAC AGCTGGGCGA ATAGTCCTGG TTTTCCTCCC TCCTATCCAA AGTTTGACCG GATGATACCC AGTACCTGTT TTGGGTGTCA CAGCTCCGCT GTAGGCATTA AAGACGTGCA TATGGAAGGA CGGCATCTGT CAGAGGAGTT TGAAAAGAAT CAGCTGGTAT ACGGTATTGA CTGTGAACGC TGTCATGGGC CTGCTGCTGC ACATGTGGCT TTTCATACTT CCCATCCGCA GGAGAAAAAT CCCATGCATA TTACAAAGGT CCGTTCCTTA CAACACCAGC AGCGACTGGA TATGTGTGCT TTGTGCCATT CCGGTTTAGG AACGCCGCAA AAGCCCGCTT TTGCCTATAA GCCCGGAGAT GCCTTGTCAG ATTATTTCTT CCCTGACTTT ACCCGTCCTA CCCGGGCTGC CGAACTGGAT GTACATGGGA AGCAATACCA GTTGTTCACC GCCAGTAAAT GTTTTGTGAA AAGTAATGAT ATGACCTGTT CTACCTGTCA TAATCCGCAT AATAGTGAGC GCAATCAGCT GGCGACATTT TCACAGCGTT GTATGAGCTG TCATCAGGCA GGGCAGCCTA CTTTCTGTAA ATTGGAAAAT ATATCGGCGG AAGTGTTGTC GAAGAATTGT ATTGATTGTC ATATGCCGGC CCTGGCATCC GGTAAGATCA CGCTGCTGAC CAACGGAGAG AACAGTCCTA CGCCTGATTC CATGCGTACG CACCTCATTA CGGTATATCC TGAAGAAGCA AAACGGGTAT TGGCCCGGTT TAAATAG
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Protein sequence | MNKRLFYVSL LIISCILIFS RCVRKAPESN SADIRGKEFA GATTCANCHR QIYDSYMHTG HFNTSAPASA GTIKGSFAAN GNSFSYSNGI RVAMERRDSG LFQTAYADST LQEIHRFDIT IGSGRKAQTF LTWSAGRYFQ LPLSWFVPAD SWANSPGFPP SYPKFDRMIP STCFGCHSSA VGIKDVHMEG RHLSEEFEKN QLVYGIDCER CHGPAAAHVA FHTSHPQEKN PMHITKVRSL QHQQRLDMCA LCHSGLGTPQ KPAFAYKPGD ALSDYFFPDF TRPTRAAELD VHGKQYQLFT ASKCFVKSND MTCSTCHNPH NSERNQLATF SQRCMSCHQA GQPTFCKLEN ISAEVLSKNC IDCHMPALAS GKITLLTNGE NSPTPDSMRT HLITVYPEEA KRVLARFK
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