| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0312 |
|---|
| Symbol | |
|---|
| ID | 8356417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 357804 |
|---|
| End bp | 358379 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644962458 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003120012 |
|---|
| Protein GI | 256419359 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA CAAACCTGGC GCTATTACAA CTGATGAAAG AACTCTCCGC AGGAGAGCAT
ACAAAAAGCG CCATTACACT CCGCCATCTC GATATAAAAC AAAAACTGAT CATGCAGGAT
CAGACATTGC AGAATGTCTA TATTATTAAG TCAGGCGTTA TTAAATGTTT TATGACCGAA
GAGAATGAGA AGGATTATAT ACTCGACTTT CTGGGAGAAG GAGAATTACT GGGGGAAATA
GAGGCGATAC GCCATAAAAC GGCTGGTTGT ACGGTAGAAG CCATTACCCC GCTGACCGTA
TATGCGCTTA CCAGTACCCA GTTCAGGCAT TTCCTGGAAA CCATCCCGGC TTTTAATATG
GCAGTGCTGG AGCAGTTGGT CAATCGTGTC ATGCGGATCT CTGAAAAGGC TTCCCGGCAT
CAATTATATA CCCTGGCAGA AATTCTGCCC CAGTTGCTGA ATACCCTTGA ATCGCAACAG
ATCAATTTCA CTAAACAAGA CCTGTCCGAA TACCTGGGCA TTTCTGTGAG AAGCCTCAAC
AGGATGCTGA AAGATACTGG TCATACGGCT ATTTAA
|
|---|
| Protein sequence | MIKTNLALLQ LMKELSAGEH TKSAITLRHL DIKQKLIMQD QTLQNVYIIK SGVIKCFMTE
ENEKDYILDF LGEGELLGEI EAIRHKTAGC TVEAITPLTV YALTSTQFRH FLETIPAFNM
AVLEQLVNRV MRISEKASRH QLYTLAEILP QLLNTLESQQ INFTKQDLSE YLGISVRSLN
RMLKDTGHTA I
|
|---|
| |