Gene Cpin_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0289 
Symbol 
ID8356394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp336798 
End bp337793 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID644962435 
Producthypothetical protein 
Protein accessionYP_003119989 
Protein GI256419336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAC TCAAATGTAA AATCATAATA GGTGACTACA AGCTCTTCGC AGTAACAGAT 
GTGAAAATAA AAAGAAGTAT CTATTCCTTT GTCGACACCG CCACTATTAC ACTGCCCGCG
TCTGCCCGCT TACAGAGTGA CGCTACTAAC GTTCCAAAAT CTGTTTCAAC GGCCGCTACC
TTCAAGGAAG GTGACAAAGT TGAGATATGG CTGGGATATG ACAACGATCT CCAGCGTGAA
TTTAAAGGCT TCATAAAAAG AGTGAATGCC GCTACACCAT GCGAGATCGA ATGTGAAGGT
TATAGCTGGC AGTTAAGACG CAAGAACATA CTATGGGCAA CAGAGAAAGA CAAAGTAACA
AAGTTGAAAG ACCTGTTGGG AACACTCATA CAGGGAACTG ATATCAAGCT GAGTGACAGT
ATACCCGACA TGGATGTGCA ACAATTCTCT GATGGGAATC GTAGTGGAAC AGAGGCACTG
GACTGGATCA AAAAAAATCT TTTCCTTACT GTCTATTTTG AAGAAGATCA ACTGTATGCA
GGCCTGGCCT TTATTAAGCA ACCCGACAGC GCCTACGCTA AATACGGTAT CGGCGTTAAC
CTGGTAAAAG AAGACCAGCT GAAATTCAGA AATGCGGAGG ATGTAAAGAT CCTGGTCAAA
GCTATCTCAT TTAATAAGCT GAATAAAGCT GTTGTTGGAA AAGCAGGTGA TGAGAACGGA
GCCATCAGGA CCATCTATGC GCAAAACGAC AAAACCCAGA AAGAGCTCGA CGAACTTGCC
CAATCAAAAA TAGGTGAGCT GAGATACAAT GGCTATGAAG GGAAAGTAAC AGGCTTCCTG
GCACCCTTCG CCCTCCCCGG TTACAGAGTT ATCCTTCAGG ACAAAAATTA CATCGAACGT
GACGGCACCT ATCTGATAGA AAGTACTGAT GTAAGCTATG GTACAGGCGG CGGCAGAAGG
ACCTGCGGAA TAGGCGTTAA AATAAGCAAA TCATGA
 
Protein sequence
MFTLKCKIII GDYKLFAVTD VKIKRSIYSF VDTATITLPA SARLQSDATN VPKSVSTAAT 
FKEGDKVEIW LGYDNDLQRE FKGFIKRVNA ATPCEIECEG YSWQLRRKNI LWATEKDKVT
KLKDLLGTLI QGTDIKLSDS IPDMDVQQFS DGNRSGTEAL DWIKKNLFLT VYFEEDQLYA
GLAFIKQPDS AYAKYGIGVN LVKEDQLKFR NAEDVKILVK AISFNKLNKA VVGKAGDENG
AIRTIYAQND KTQKELDELA QSKIGELRYN GYEGKVTGFL APFALPGYRV ILQDKNYIER
DGTYLIESTD VSYGTGGGRR TCGIGVKISK S