Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0282 |
Symbol | |
ID | 8356387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 331484 |
End bp | 331894 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962428 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_003119982 |
Protein GI | 256419329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.567186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAA TAGACTTTAT TGTTATCCAT TGTACTGCGA CCTCTCAGGA TACTCGTCCT GAAGCAATCC GGAATTACTG GAAAGAATAT CTCAAATGGA AAAGTCCCGG TTATCACTAC CTGATTGAAG CATCAGGTAA TGTAATACAA CTGGCAACAG AAGATCGTGT CTGCAACGGC GTAGCAGGAT ATAATGCAAA TAGCATCCAC GTCAGTTATA TCGGCGGAGT AGATGCTGAT AACAGGCCAT TAGATAACAG AACGATCGCA CAACAAGACG CAATGAGAAC ATTGGTCACG CTATTAAAGC AACAATATCC GCAAGCGCGG ATCCAGGGCC ACCGGGACTT TCCATTTGTT AAAAAAGCTT GCCCATCTTT TGATGCACGT GAAGCATTCA GTGATTTATA A
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Protein sequence | MRRIDFIVIH CTATSQDTRP EAIRNYWKEY LKWKSPGYHY LIEASGNVIQ LATEDRVCNG VAGYNANSIH VSYIGGVDAD NRPLDNRTIA QQDAMRTLVT LLKQQYPQAR IQGHRDFPFV KKACPSFDAR EAFSDL
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