Gene Cpin_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0282 
Symbol 
ID8356387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp331484 
End bp331894 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content43% 
IMG OID644962428 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_003119982 
Protein GI256419329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.567186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGAA TAGACTTTAT TGTTATCCAT TGTACTGCGA CCTCTCAGGA TACTCGTCCT 
GAAGCAATCC GGAATTACTG GAAAGAATAT CTCAAATGGA AAAGTCCCGG TTATCACTAC
CTGATTGAAG CATCAGGTAA TGTAATACAA CTGGCAACAG AAGATCGTGT CTGCAACGGC
GTAGCAGGAT ATAATGCAAA TAGCATCCAC GTCAGTTATA TCGGCGGAGT AGATGCTGAT
AACAGGCCAT TAGATAACAG AACGATCGCA CAACAAGACG CAATGAGAAC ATTGGTCACG
CTATTAAAGC AACAATATCC GCAAGCGCGG ATCCAGGGCC ACCGGGACTT TCCATTTGTT
AAAAAAGCTT GCCCATCTTT TGATGCACGT GAAGCATTCA GTGATTTATA A
 
Protein sequence
MRRIDFIVIH CTATSQDTRP EAIRNYWKEY LKWKSPGYHY LIEASGNVIQ LATEDRVCNG 
VAGYNANSIH VSYIGGVDAD NRPLDNRTIA QQDAMRTLVT LLKQQYPQAR IQGHRDFPFV
KKACPSFDAR EAFSDL