Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0276 |
Symbol | |
ID | 8356381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 326874 |
End bp | 327704 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962422 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003119976 |
Protein GI | 256419323 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC AAAAAGTGTG GTTAATCACT GGCAGCTCAC AAGGACTCGG CCTGGCAACT ATCCGATATT TGTTAAATAA AGGACAAATT GTTTTTGCAA CGACTCGCGA TAGCACACGA TTTAGCAGGG ACTTATTTGA ACATCCCCAC TTTCATGCAA TCGCCCTGGA TCTTACCAAA GAGGAGGAAG TCAAAATGGC CATTGGTGAT GTGTATAAAA AGTACCAACG GATTGATGTA CTGGTAAATA ATGCCGGTTA CGGTTTTGTT GGCGCCGTCG AGGAAGCTTC CGTGCAGGAA ATACATCAGG TAGTCGACAT TAACGTACAT GCCACTATCC GAATGATCAG GCATGTGTTA CCATATATGC GTGGACAGAG AAACGGACAT ATCATCAATA TCTCATCTAT GGCAGGTCTT ATCAGTTCCG CGGGTTGGGG TATTTATAAT CTTACCAAAT ATGCAGTAGA AGGGTTTTCC GAAGCGCTGT ACCATGAATT AATACCCTTA GGCATTCATG TAACCATTCT TGAACCTGGC GCCTTCCGTA CCCGCTTCCT GGCAGGATCA CTAACCACTG CTGCAACAAT CATAAGCGAT TATGATACAA CAGCAGGCAA TCGCAGACGC ATGCTTGCCG GAAATAATGG ACATCAGCCC AACGACCCTG AGAAAGCGGC AGCTGCCATC TTCCAGCTTA TTCATATGGA AAATCCTCCA CTCCGGCTTT TGCTTGGTCA GGACGCATAT GACCGTGCCT TCGAAAAAAT CCGATTGCTT CAGCAAGACT TCCAACGGAT GAAAAACATA ACGCTATCGA CAGGCTTTTG A
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Protein sequence | MKNQKVWLIT GSSQGLGLAT IRYLLNKGQI VFATTRDSTR FSRDLFEHPH FHAIALDLTK EEEVKMAIGD VYKKYQRIDV LVNNAGYGFV GAVEEASVQE IHQVVDINVH ATIRMIRHVL PYMRGQRNGH IINISSMAGL ISSAGWGIYN LTKYAVEGFS EALYHELIPL GIHVTILEPG AFRTRFLAGS LTTAATIISD YDTTAGNRRR MLAGNNGHQP NDPEKAAAAI FQLIHMENPP LRLLLGQDAY DRAFEKIRLL QQDFQRMKNI TLSTGF
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