Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0264 |
Symbol | |
ID | 8356369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 314024 |
End bp | 314641 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962411 |
Product | pyridoxamine 5'-phosphate oxidase-related FMN- binding |
Protein accession | YP_003119965 |
Protein GI | 256419312 |
COG category | [R] General function prediction only |
COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTATT CATCACTGGC ATTTACAGAT GCGGTCAGAG ATATGCAGGA AAAATTGGGT AGCCGTAAAA GCTATGCCCG TCTGGAGAAT AGAAACTATG TAGATGGTCT GACAGAGAAT GAAATGGCAT TTATTTCAGA CCGGGATAGC TTTTATATGG CTACCATCGG GGAGAATGGA TATCCTTATA TACAACATCG GGGTGGTCCC AAAGGATTTG TCAAGGTGTT GAATGCAACA CAGATGGGCA TTATTGACTA TAAAGGAAAC GCCCAGTATA TCACGGTTGG CAATATTACC GACAACAATC ATGTATCAGT GATCATGGTG GATTATCCAA CGAGAACAAG ACTGAAATTG TATGCCAGTG CCAGGATTGT AGAACTGGAG GATGACCCCG TGCTGTATGA ACAACTTCGT ACTGATGGTT ATCAGTTTCG CCCGGAAAGG ATGATGTTGT TTGATATAGA CGCCTACGAC TGGAATTGTC CGCAACACAT CACGCCCCGG TATTCCCTTG AGGAGATCAA TAAAGCTTTT GCATCACAAC GCCAATACAT TTTGCAATTA GAAACCGAAC TGAAGAAACT GAAGGAAAGA CCAGTGGCTG ACGAGTAA
|
Protein sequence | MNYSSLAFTD AVRDMQEKLG SRKSYARLEN RNYVDGLTEN EMAFISDRDS FYMATIGENG YPYIQHRGGP KGFVKVLNAT QMGIIDYKGN AQYITVGNIT DNNHVSVIMV DYPTRTRLKL YASARIVELE DDPVLYEQLR TDGYQFRPER MMLFDIDAYD WNCPQHITPR YSLEEINKAF ASQRQYILQL ETELKKLKER PVADE
|
| |