Gene Cpin_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0257 
Symbol 
ID8356362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp308193 
End bp308780 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content39% 
IMG OID644962404 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003119958 
Protein GI256419305 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC ACTTCTTTTA CCTTTTGTTC TTTTGCATCG CCGCCAGCCT GCAAGGATAT 
TCAGGCATCG GCCCAACGCA ACCACCCATT GACACGCTAT TAGACATCCC TGCGCCCCGA
TTCAGCATGT TAGATACAAA CGGAAAAACT GTAAGTCTTT CTGACTTTAA AAATAAAGTG
CTGGTAGTAT ATTTTTGGTC AACGTGGTGC TACTACTGCC ATAAAGATTT CCCCATGATT
AATAAAGTAG TAAAACAATA TGCAAATGAC ACAACTGTAG CCTTCCTTTT TGTGGACACA
CGAGAGAAAT CAGATCAATA TAAAGAGCTC GTACAAAAAG ACATGGTAAA GAATAATTAC
AACTTCCATG TTGTGTTTGA TGAAAAAGGG AAAGATAGTC TTCAAAATAA ATATTACACT
CAATTTGGAA CTATAGGCAT TCCTACACGA TTTGTGATTG ACCGGAATAT GGTCATTCGA
CATAAGTTTG TAGGCTATGA TCCAGATGTT AATGAAGAGC AGGCCGCAGC TGCATTCAGC
CGTTCAATTG AAGACACCAA AAAATTAGCG TCTCACAATA AGCCTTAA
 
Protein sequence
MKKHFFYLLF FCIAASLQGY SGIGPTQPPI DTLLDIPAPR FSMLDTNGKT VSLSDFKNKV 
LVVYFWSTWC YYCHKDFPMI NKVVKQYAND TTVAFLFVDT REKSDQYKEL VQKDMVKNNY
NFHVVFDEKG KDSLQNKYYT QFGTIGIPTR FVIDRNMVIR HKFVGYDPDV NEEQAAAAFS
RSIEDTKKLA SHNKP