Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0254 |
Symbol | |
ID | 8356359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 304631 |
End bp | 305920 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962401 |
Product | Epoxide hydrolase domain protein |
Protein accession | YP_003119955 |
Protein GI | 256419302 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATAA AAATTTCTAA TATCCTTGTG GCAGCAACCT TATCCGTAGG TATTCCTGCA ATTGGTATAG CACAGACGAC CGGAGCAAAA ACGGCAACAG TAGCCTCCGA TATCAGTATC AGGCCTTTCA GGATCAACAT CCCCCAGGCG AAACTCGATG GACTGAAAAG ACGTATCGCT GAAACCAACT TCCCGGATAA GGAAACTGTC AACGATGAAT CTCAGGGTAT CCAACTGGCA CAATTAAAAG AACTCGTAGA CTACTGGGGA AATGGCTATG ACTGGAGAAA ACTGGAAAAC AAGTTAAATG CCCTTCCTCA GTTTGTGACA AACATTGATG GTTTGGATAT CCAGTTCATC CATGTACGCT CAAAAGAACC TAATGCACTG CCTGTCATTC TTACCCACGG CTGGCCAGGT TCTCCGCTGG AGTTCATTGA TGCCATAGGC CCCTTAACTG ATCCCGTAAA ATATGGCGGT AAAGCAGAAG ATGCATTTGA TGTAATAATA CCTGCAATCC CCGGATATGG TTTCTCAGAA ATACCCAAAG AAACAGGCTG GAATCCCGAT CGAGTCGCCA AAGCATGGGA CGTTCTGGTA AAACGTCTTG GTTACAAAAA ATATGTTTCC GAAGGTGGCG ACCATGGTTC AGTGATCTCC GATGCCCTGG CAAGACAAGC ACCATCCGGA CTTTTAGGTA TACATCTTAC GATGCCGGCC ACAATTCCCG CTGAACTTGT AAAACCAATT AATGCAGGAG ATCCTGCCCC ATCAGGACTT TCTGCAGACG AAACAAAGGC ATATAATGCT TTAAGTACTT TCTTTGGAAG AAACGCAGCT TATGGAGGAA TGATGGTAAC ACGTCCACAG ACTACCGGCT ACCTGCTTTC CGATTCTCCA AGTGCATTGG CAGCATTCCT CTACGAAAAA ATTGCAGAAT GGACAGATAG CGACTTAAAA CCTGAAAAGG TAATAAGCAG AGACGCCATC CTCGATGATA TTACACTCTA TTGGCTGACC AATACAGGCG CCTCCTCTTC CCGGTTCTAT TGGGAAAACC ATAACAATAA TTTCAGTTCC GATCATCAGA AAACAAAGGA CATAAAAGTT CCTGTTGCCA TTTCTGTTTT TCCACATGAA ATTTATGAGG CTCCTGAAAG CTGGTCCAGG AAAGCATATC CATCATTGTA TTACTATCAT AAAGCACCTA AAGGTGGTCA CTTTGCAGCA TGGGAACAGC CACAAATCTT TACGGAAGAA CTTAGAGCTG CCTTCAGATC TTTACGATAA
|
Protein sequence | MRIKISNILV AATLSVGIPA IGIAQTTGAK TATVASDISI RPFRINIPQA KLDGLKRRIA ETNFPDKETV NDESQGIQLA QLKELVDYWG NGYDWRKLEN KLNALPQFVT NIDGLDIQFI HVRSKEPNAL PVILTHGWPG SPLEFIDAIG PLTDPVKYGG KAEDAFDVII PAIPGYGFSE IPKETGWNPD RVAKAWDVLV KRLGYKKYVS EGGDHGSVIS DALARQAPSG LLGIHLTMPA TIPAELVKPI NAGDPAPSGL SADETKAYNA LSTFFGRNAA YGGMMVTRPQ TTGYLLSDSP SALAAFLYEK IAEWTDSDLK PEKVISRDAI LDDITLYWLT NTGASSSRFY WENHNNNFSS DHQKTKDIKV PVAISVFPHE IYEAPESWSR KAYPSLYYYH KAPKGGHFAA WEQPQIFTEE LRAAFRSLR
|
| |