Gene Cpin_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0254 
Symbol 
ID8356359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp304631 
End bp305920 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID644962401 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_003119955 
Protein GI256419302 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA AAATTTCTAA TATCCTTGTG GCAGCAACCT TATCCGTAGG TATTCCTGCA 
ATTGGTATAG CACAGACGAC CGGAGCAAAA ACGGCAACAG TAGCCTCCGA TATCAGTATC
AGGCCTTTCA GGATCAACAT CCCCCAGGCG AAACTCGATG GACTGAAAAG ACGTATCGCT
GAAACCAACT TCCCGGATAA GGAAACTGTC AACGATGAAT CTCAGGGTAT CCAACTGGCA
CAATTAAAAG AACTCGTAGA CTACTGGGGA AATGGCTATG ACTGGAGAAA ACTGGAAAAC
AAGTTAAATG CCCTTCCTCA GTTTGTGACA AACATTGATG GTTTGGATAT CCAGTTCATC
CATGTACGCT CAAAAGAACC TAATGCACTG CCTGTCATTC TTACCCACGG CTGGCCAGGT
TCTCCGCTGG AGTTCATTGA TGCCATAGGC CCCTTAACTG ATCCCGTAAA ATATGGCGGT
AAAGCAGAAG ATGCATTTGA TGTAATAATA CCTGCAATCC CCGGATATGG TTTCTCAGAA
ATACCCAAAG AAACAGGCTG GAATCCCGAT CGAGTCGCCA AAGCATGGGA CGTTCTGGTA
AAACGTCTTG GTTACAAAAA ATATGTTTCC GAAGGTGGCG ACCATGGTTC AGTGATCTCC
GATGCCCTGG CAAGACAAGC ACCATCCGGA CTTTTAGGTA TACATCTTAC GATGCCGGCC
ACAATTCCCG CTGAACTTGT AAAACCAATT AATGCAGGAG ATCCTGCCCC ATCAGGACTT
TCTGCAGACG AAACAAAGGC ATATAATGCT TTAAGTACTT TCTTTGGAAG AAACGCAGCT
TATGGAGGAA TGATGGTAAC ACGTCCACAG ACTACCGGCT ACCTGCTTTC CGATTCTCCA
AGTGCATTGG CAGCATTCCT CTACGAAAAA ATTGCAGAAT GGACAGATAG CGACTTAAAA
CCTGAAAAGG TAATAAGCAG AGACGCCATC CTCGATGATA TTACACTCTA TTGGCTGACC
AATACAGGCG CCTCCTCTTC CCGGTTCTAT TGGGAAAACC ATAACAATAA TTTCAGTTCC
GATCATCAGA AAACAAAGGA CATAAAAGTT CCTGTTGCCA TTTCTGTTTT TCCACATGAA
ATTTATGAGG CTCCTGAAAG CTGGTCCAGG AAAGCATATC CATCATTGTA TTACTATCAT
AAAGCACCTA AAGGTGGTCA CTTTGCAGCA TGGGAACAGC CACAAATCTT TACGGAAGAA
CTTAGAGCTG CCTTCAGATC TTTACGATAA
 
Protein sequence
MRIKISNILV AATLSVGIPA IGIAQTTGAK TATVASDISI RPFRINIPQA KLDGLKRRIA 
ETNFPDKETV NDESQGIQLA QLKELVDYWG NGYDWRKLEN KLNALPQFVT NIDGLDIQFI
HVRSKEPNAL PVILTHGWPG SPLEFIDAIG PLTDPVKYGG KAEDAFDVII PAIPGYGFSE
IPKETGWNPD RVAKAWDVLV KRLGYKKYVS EGGDHGSVIS DALARQAPSG LLGIHLTMPA
TIPAELVKPI NAGDPAPSGL SADETKAYNA LSTFFGRNAA YGGMMVTRPQ TTGYLLSDSP
SALAAFLYEK IAEWTDSDLK PEKVISRDAI LDDITLYWLT NTGASSSRFY WENHNNNFSS
DHQKTKDIKV PVAISVFPHE IYEAPESWSR KAYPSLYYYH KAPKGGHFAA WEQPQIFTEE
LRAAFRSLR