| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0248 |
|---|
| Symbol | |
|---|
| ID | 8356353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 299279 |
|---|
| End bp | 300061 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644962395 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_003119949 |
|---|
| Protein GI | 256419296 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTAA GAGCTTCTTC TTTCTTCGAA ATGTATGCGG CGTCGCCTGT AACGAGTACT
TTTATGTTAC GTTCCATAAG CGGGCCTTCA CAGTTTATAC AGCAGGAAAC GTTTGTAGTA
TCCCCACAGG TACCTGTGAG TGAATACGTA GACGGATATG GTAATCTCTG CCAGCGTATT
ATTATTCCTT CCGGAACCTT TACACTGGAA AGCAGTGTCG TTGCGATATG TGACGCTAAT
ATCGATGTGG ATATGAACGC TCCGTATACC CCCATAGAAG ATCTCCCTGA TCATGTACTA
CAGTTTTTAC TACCCAGCAG GTATTGCGAA TCCGATAAAG TAACAGAGCT CGCTAGAATA
ATTGTAGATG GAGTACTGCC CGGCTATGCG CAGGTAGAGG CTATCCGGCA ATGGTGTCAT
GTTAATCTTA CTCGTCAGTA TGGCAGTACA AACAGCTCTA CGTCTGCAAT GGATGTGCTA
TTAAGCAAAA CAGGGGTATG TCGTGATTTT ACACATGTGG CTATTGCGCT GTGCCGCAAT
ATGGATATAC CTGCCCGTAT GGTGGTAGGG TATCTTCATG ATTTAGAGCC TATGGACTTG
CATGCATGGT TTGAAGCGTA TGTAGGAGGG CGATGGTATA CATTTGATTC GATAATGGAC
CGGCCTGTGG GCGGACGGGT GATTATGGCA TATGGCAGAG ATGCGGCAGA TGTTGCTTTT
GCCAGTCATT TTGGATATGT AGAACTGAAA AAAATGGAGG TGAAAGTCAC CAGGGATGTC
TGA
|
|---|
| Protein sequence | MLLRASSFFE MYAASPVTST FMLRSISGPS QFIQQETFVV SPQVPVSEYV DGYGNLCQRI
IIPSGTFTLE SSVVAICDAN IDVDMNAPYT PIEDLPDHVL QFLLPSRYCE SDKVTELARI
IVDGVLPGYA QVEAIRQWCH VNLTRQYGST NSSTSAMDVL LSKTGVCRDF THVAIALCRN
MDIPARMVVG YLHDLEPMDL HAWFEAYVGG RWYTFDSIMD RPVGGRVIMA YGRDAADVAF
ASHFGYVELK KMEVKVTRDV
|
|---|
| |