Gene Cpin_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0242 
Symbol 
ID8356346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp291616 
End bp293283 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content48% 
IMG OID644962388 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_003119943 
Protein GI256419290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG AAAGGACCCT CAATTTTCTG GAACAGATTA TAGAAGAGGA CATTGCCAAC 
GGCGTCAATG ACGGCAGGGT GCTTACACGC TTCCCTCCGG AACCAAATGG CTATCTGCAC
ATTGGTCACG CTAAATCCAT CTGCCTCAAC TTCGGCATCG CCCAGAAGTA CAACGGTAAA
ACCAACCTCC GTTTTGACGA TACCAATCCC GTTACGGAGG ATACTGAATA TGTGGATTCC
ATTAAGGCCG ACATACAATG GCTGGGCTTC CAATGGGCAC AGGAACTGTA TGCTTCAGAT
TATTTCGAAC AGATATACAA CTTCGCAGTA AAACTGATCA ATAAAGGACT GGCTTACGTA
GATGACTCTA CCGCTGAAGA AATCGCGGCT TCTAAAGGTA CGCCGACCGA ACCGGGTAAA
GGCACTACCT ACCGCAACCG CAGTGTAGAA GAAAACCTGG ACCTCTTCGC CCGTATGCGT
GCAGGAGAGT TTAAGGACGG CGAAAAGGTA TTACGTGCAA AAGGAGACCT GGCTTCTCCA
AACATGCACA TGCGTGATCC TATCATTTAT CGTATCAAAC ATGCGCATCA CCACCGTACC
GGTGACAGCT GGTGTATCTA TCCGATGTAT GACTTTGCCC ACGGACAAAG CGACAGCATC
GAAACGATCA CCCATTCCAT CTGTACCCTG GAGTTTATTC CTCACCGCCC GTTGTACAAC
TGGTTCATCG AGCAACTGGA AATATTCCCG TCCCGCCAAT ATGAATTTGC CCGTCTGAAC
CTTACCTATA CGGTAATGAG CAAACGTAAA CTTCTGCAGC TGGTGAACGA GAAACACGTC
AGCGGATGGG ATGACCCACG TATGCCGACC ATCAGTGGTC TGCGTCGTCG TGGTTATACA
CCTGCAAGTA TCCGCGCTTT CTGTGAACGC ATTGGTATCC AGAAACGTGA TAATATGATC
GATGTGAGTC TGCTGGAATT CTGTATCCGT GAGGAACTGA ATAAAACAGC AAACCGCGTA
TTCGCAGTAC TGGATCCGGT TAAACTGGTA ATTACCAACT ATCCTGAAGG TCAGGTAGAA
GAGATGACCG CAGAAAATAA CCCGGAAGAT CCAAACTCCG GTACACGTAT CCTGCCTTTC
AGCAATACAC TGTACATCGA GCGTGAAGAC TTCATGGAAG AACCGCCTAA GAAATTCTTC
CGTCTTGGCC CAGGTCTGGC TGTACGACTG AAAAATGCCT ACATCATCAA AGGCGAAAGC
TTTGAAAAAG ATGCAGATGG CAATATCACG ACTATCTATG CTACCTACCT GCCGGAAAGC
AAAAGCGGTG GCGATACCAG CGGTCTGACC GTAAAAGGAA CGATCCACTG GGTAAGTGCA
GCACATGCAG CTACAGCTGA AGTAAGACTG TACGACCGCC TGTTTAAAGT GGAAGATCCA
GGTAATGAAG AAGGTGATTT CAAATCTTAT ATCAACCCTG ATTCCCTGCA GGTCATTTCA
AAGGCTTATG TTGAGCCAAG TCTGCTGAAT GCTAAACCAG GCGAACGCTT CCAGTTCCTG
CGCAAAGGCT ATTTCGCTGC AGATGCTGAC AGCACTCCTG ATAACGTAGT ATTCAACCGC
ACAGTGACAC TGAAAGATGC CTGGGCGAAG GAAGCTAAGA AAGGATAA
 
Protein sequence
MSEERTLNFL EQIIEEDIAN GVNDGRVLTR FPPEPNGYLH IGHAKSICLN FGIAQKYNGK 
TNLRFDDTNP VTEDTEYVDS IKADIQWLGF QWAQELYASD YFEQIYNFAV KLINKGLAYV
DDSTAEEIAA SKGTPTEPGK GTTYRNRSVE ENLDLFARMR AGEFKDGEKV LRAKGDLASP
NMHMRDPIIY RIKHAHHHRT GDSWCIYPMY DFAHGQSDSI ETITHSICTL EFIPHRPLYN
WFIEQLEIFP SRQYEFARLN LTYTVMSKRK LLQLVNEKHV SGWDDPRMPT ISGLRRRGYT
PASIRAFCER IGIQKRDNMI DVSLLEFCIR EELNKTANRV FAVLDPVKLV ITNYPEGQVE
EMTAENNPED PNSGTRILPF SNTLYIERED FMEEPPKKFF RLGPGLAVRL KNAYIIKGES
FEKDADGNIT TIYATYLPES KSGGDTSGLT VKGTIHWVSA AHAATAEVRL YDRLFKVEDP
GNEEGDFKSY INPDSLQVIS KAYVEPSLLN AKPGERFQFL RKGYFAADAD STPDNVVFNR
TVTLKDAWAK EAKKG