Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0229 |
Symbol | |
ID | 8356333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 275024 |
End bp | 276241 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962375 |
Product | Cysteine desulfurase |
Protein accession | YP_003119930 |
Protein GI | 256419277 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAC TGCCCGTTTA CCTGGATTAT AATGCTACTA CCCCCTGCGA TCCGCGCGTA GTAGAGGCCA TGCTTCCCTA TTTTTCGGAG ACATTTGGTA ATGCATCCAG CCGTAACCAT TCTTTTGGCT GGGCAGCAGA GGCAGCAGTC GATCTGGCCC GTGAGCAGGT AGCTGCGCTA ATAGGTGCAG ATCCTAAGGA GATTATCTTC ACCTCCGGGG CTACGGAAGC CGATAACCTT GCGATGAAAG GCGTGTTTGA AATGTATGCC GACAAGGGCA ACCATATCAT TACGACTGAA ATTGAACACA AAGCAGTGCT GGACACCTGC AAACACCTGG AAAAACTAGG GGCAGAGATA ACTTATCTCA AGGTGAACAG TGAGGGCTTT CCGGATCTGA AAGAACTGGA AGCAGCCATC ACGCCAAGAA CCATCCTGGT GTCCATCATG TATGCCAATA ACGAAATAGG GGTTATTAAT CCTATAAAAG AGATCAGCGC CATTGCCAAG AGGCATGGAG TGCTGATGAT GAGCGACATA TCCCAGGCGG CAGGAAAAGT GCCTGTGGAT GTCAACCGCG ATGGTATCGA CCTGGCGGCC TTCAGCGCTC ATAAGCTCTA CGGTACCAAA GGAGCAGGCG CCCTTTATGT ACGTCGTAAA TCTCCGCGTG TAAAAGTAAC TGCGCAGATG GATGGCGGCG GACATGAACG CGGGATGCGC TCCGGTACGC TCAACGTACC AGGTATTGTA GCTTTCGGAA AAGCCTGTGA ATTATGCCAA CAGGAAATGG AAGCAGAAGG ACAAAGACTG GCAGCCCTGC GTGACAAACT GGAAAACGCA TTGCTGCAAC TGGAAGAAAC CGTTGTCAAC GGATCAAGAA CCAACCGTTT ACCGCATGCC ACCAACATTT CCTTCCGTTA TGTGGAAGGA GAAGCCCTGA TGATGGGTTT TAACAAGAAT CTTGCGCTAT CATCCGGTTC TGCCTGTACC TCCGCCTCTC CGGAACCCAG TTACGTATTG AAGGGACTTG GCCTCAGCGA TGATATGGCC CATTCTTCCA TTCGTTTTGC ACTGGGACGC TTCACAACTG AAGAAGAGAT CGATTATGCT ATTCAAACCG TTACAGATAC GGTCAATAAA CTTAGAGAAA TAAGTCCGCT GTGGGAAATG TTTAAAGAAG GTGCGGACAT GAGCTCAATA GAGTGGTCCC GTCTTTGA
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Protein sequence | MLKLPVYLDY NATTPCDPRV VEAMLPYFSE TFGNASSRNH SFGWAAEAAV DLAREQVAAL IGADPKEIIF TSGATEADNL AMKGVFEMYA DKGNHIITTE IEHKAVLDTC KHLEKLGAEI TYLKVNSEGF PDLKELEAAI TPRTILVSIM YANNEIGVIN PIKEISAIAK RHGVLMMSDI SQAAGKVPVD VNRDGIDLAA FSAHKLYGTK GAGALYVRRK SPRVKVTAQM DGGGHERGMR SGTLNVPGIV AFGKACELCQ QEMEAEGQRL AALRDKLENA LLQLEETVVN GSRTNRLPHA TNISFRYVEG EALMMGFNKN LALSSGSACT SASPEPSYVL KGLGLSDDMA HSSIRFALGR FTTEEEIDYA IQTVTDTVNK LREISPLWEM FKEGADMSSI EWSRL
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