| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0228 |
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| Symbol | |
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| ID | 8356332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 274482 |
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| End bp | 274880 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644962374 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_003119929 |
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| Protein GI | 256419276 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAAAG TTGAACATAT AGGAATAGCA GTCAAATCAT TAGACATCTC AATACCCTTA
TTTGAGAAGC TTCTGAACAG TGGTTGCTAT AAAAAAGAAC TAGTGGAAAG CGAGTTCGTA
GAAACCGCTT TTTTCCAGAC CGGACAAACA AAAATCGAAC TCCTGGAGGC GACCGGCCCC
GACAGCGCAA TTGCCAAATT TGTGGACAAA AAGGGTGAGG GGATACATCA CATCGCATTC
GAAGTGACTG ATATCTATGC TGAAATGGAA AGATTAAGTA AAGAAGGATT CACGCTATTG
CAAACTCAAC CGAAAAAAGG AGCAGATAAT AAACTGGTTT GTTTTCTGCA CCCAAAAGGT
ATAAATGGCG TACTGGTGGA GCTTTGCCAG GAAATCTGA
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| Protein sequence | MQKVEHIGIA VKSLDISIPL FEKLLNSGCY KKELVESEFV ETAFFQTGQT KIELLEATGP
DSAIAKFVDK KGEGIHHIAF EVTDIYAEME RLSKEGFTLL QTQPKKGADN KLVCFLHPKG
INGVLVELCQ EI
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