| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0227 |
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| Symbol | |
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| ID | 8356331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 272456 |
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| End bp | 273772 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962373 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003119928 |
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| Protein GI | 256419275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATC AGCTGAATTT TAATATTTTT GTTTTTATGA ACATTGATCA GCTTTACGAT
ATATACCGGC AATATCCATC TGTCCAGACA GATACCAGAC AGCTCAAGGC GGGCGATATT
TTCTTCGCGC TGAAGGGCCC GAATTTTAAC GGGAATACTT ATGCGGCAGC TGCGCTTGAA
AAAGGGGCTG TATTTGCTGT AGTGGATGAG GAGGCGTATT ATACGCAGCC GGATAAAATG
ATGCTGACCA ATGATGCATT GGAAACCTTG CAGCAACTGG CGCTTCGTCA CAGGCAAAGT
CTCAATATTC CGTTCCTGGC CATCACCGGC ACTAACGGTA AAACGACTAC GAAAGAGCTT
GTCAGCACGG TGCTGGCGAG CGCATTCAAA ACCACTGCTA CCGCAGGTAA TCTGAACAAT
CATATCGGCG TACCATTGAC AATTTTACGC ATTCCTGCTG ATGCGGAAAT GGCAGTCATT
GAAATGGGGG CTAATCATGA GCATGAAATA GAAGCCTATT GTAAGGTGGC ACTGCCTACA
CATGGCATTA TCACCAATAT CGGGAAAGCG CACCTGGAGG GCTTTGGAAG TCCTGAAGGC
GTACGCAGGG CGAAAGGAGA ACTGTATGAT TTTCTGCGTA ATAATAAGGG CACTGTTTTC
GTATGCAATG AGTATCCTTA CTTAGTAGAT ATGAGTAAAG GTATTCAGAC TGTTATTACT
TATGGAGAAG CTGCTGCTGA CTATACAGGA CAGCCGCTGG CAGACAGCGC CTTGTTAAGT
GTAAAAGTAA CAGGCCATGA GGGTATCGGA CAAATCGATA GTCAGCTGGT AGGCGCATAT
AATTTTCCGA ATATAATGGC GGCTGTTGCT GTCGGACTGC ACTTCGGTGT ACCAGCTGAA
AAGATACAAC ACGCGATCTC TTCTTATGTG CCTTCAAATA ACCGTTCTCA GGTGATGAAA
CAGGGCAGCA ATACCATTAT CATGGATGCA TACAATGCAA ATCCATCCAG TATGAAAGCT
GCCATAGACA ATTTTGCGGG TATTACTGCG GAGAAGAAAG TGCTGTTATT AGGCGGTATG
ATGGAATTAG GTGATGACAG CGTAGCAGAA CATCAGGCAC TGGTAGATCT TTTGCAACGT
ACACACTGGC ACGCGGTGGT ACTGGTAGGC GGAGATTTTA TCAAAACCAA TCACCCTTAT
ATCTACCAGG AAAATGCGGC AGCTGCAGCT ATATGGCTAC AGCAACAACA ATTCACTGAC
ACCTACTTAC TGATTAAAGG ATCAAGAAGT ATGGGTATGG AAAAGGTAAT TGCATAA
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| Protein sequence | MDYQLNFNIF VFMNIDQLYD IYRQYPSVQT DTRQLKAGDI FFALKGPNFN GNTYAAAALE
KGAVFAVVDE EAYYTQPDKM MLTNDALETL QQLALRHRQS LNIPFLAITG TNGKTTTKEL
VSTVLASAFK TTATAGNLNN HIGVPLTILR IPADAEMAVI EMGANHEHEI EAYCKVALPT
HGIITNIGKA HLEGFGSPEG VRRAKGELYD FLRNNKGTVF VCNEYPYLVD MSKGIQTVIT
YGEAAADYTG QPLADSALLS VKVTGHEGIG QIDSQLVGAY NFPNIMAAVA VGLHFGVPAE
KIQHAISSYV PSNNRSQVMK QGSNTIIMDA YNANPSSMKA AIDNFAGITA EKKVLLLGGM
MELGDDSVAE HQALVDLLQR THWHAVVLVG GDFIKTNHPY IYQENAAAAA IWLQQQQFTD
TYLLIKGSRS MGMEKVIA
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