Gene Cpin_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0214 
Symbol 
ID8356314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp260301 
End bp261386 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content46% 
IMG OID644962356 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003119915 
Protein GI256419262 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC GATATGACAG ACACCTGAAA CTGGATGGCT TCGGACCAGC AAAACAACAG 
CTGCTCAGCA ATGCAGCAGT ACTGATTATA GGTGCAGGCG GATTAGGCGT ACCTGTATTA
CAATACCTGA CCGCTATGGG CGTAGGCCGC ATAGGAATCG TAGAACACGA TGATATTTCA
CTCACCAACC TGCAAAGACA GGTCCTTTAC AATACGGATG AAGTCGGGCA ACCCAAACTG
CGTACCGCTG TTCAGCGTTT AAAAAAGCTG AACCCGGAGG TACAGTTCTC TACATATGAT
ACGTGGATCA TGCCTGATAA TGCACTGGAC ATTATTCAAC CTTACGATGT AGTAGTGGAT
TGTACGGATA ATTTCGGTAC CCGCTACCTG GTGAATGATG CCTGTGTCAT GCTGAACAAG
CCTTTTGTAT ACGGTGCTAT TCACAAATAT GAAGGTCAGG TCAGCGTATT CAATTACAAA
GGTGGTGCTA CTTACCGCTG TTTATTTCCT GAGCAACCGG AACCAGGTAC TATGCTGAAT
TGCAGCGATA TTGGTGTACT GGGGATTCTG CCGGGTATCA TCGGCTCTTA TCAGGCTAAT
GAAACAGTGA AGATCGTTAC CGGTATCGGT GAGGTATTAA GCAATCAGCT GCTGACAATA
GATACCCTGT ATAATATGCA CGATACATTC CAGATTAAGC CTGTTGCCGG TAATCATGAC
ATCAAAGCAT TACAGGAAAC CTATGACCAG CCCTGTGATA CCGGAGGTGT AAGAAGTTTA
TCTGTGCATC AGTTACAGGA CTGGCTGGAT ACAGAAAAAC CATTACAGTT GATAGATGTG
AGAGAACCGG ATGAATGGGA AATATGCAGT ATTCCACAAG CGATGCGGAT ACCGATGCGT
ATGGTGGGAG GCGTAATGGC ACAGCTGAGC AAAGAGATCC CTGTTGCCTT ACTCTGTCAT
CATGGGATGC GCAGTCTGAT GGTGGCGCAG CAACTGGATG CAGCAGGATT TCCTGCGGTA
TATAATGTGG AAGGTGGTAT TCATGCCTGG GCCGCAGAAA TAGATGTGGA AATGAACAGG
TATTAA
 
Protein sequence
MMQRYDRHLK LDGFGPAKQQ LLSNAAVLII GAGGLGVPVL QYLTAMGVGR IGIVEHDDIS 
LTNLQRQVLY NTDEVGQPKL RTAVQRLKKL NPEVQFSTYD TWIMPDNALD IIQPYDVVVD
CTDNFGTRYL VNDACVMLNK PFVYGAIHKY EGQVSVFNYK GGATYRCLFP EQPEPGTMLN
CSDIGVLGIL PGIIGSYQAN ETVKIVTGIG EVLSNQLLTI DTLYNMHDTF QIKPVAGNHD
IKALQETYDQ PCDTGGVRSL SVHQLQDWLD TEKPLQLIDV REPDEWEICS IPQAMRIPMR
MVGGVMAQLS KEIPVALLCH HGMRSLMVAQ QLDAAGFPAV YNVEGGIHAW AAEIDVEMNR
Y