Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0213 |
Symbol | |
ID | 8356313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 259058 |
End bp | 260224 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962355 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_003119914 |
Protein GI | 256419261 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TATTTGGCTG GTTACATCTC TGGCTGGGCA TCGGCTCCGG TTTAGTAGTC CTGGTAGTAG CAGGAACAGG CAGCCTGCTG GTATTCGAAG AGGAACTGGA ACATGCGTTC CGGTCTTCTT TTTTCTACGT AGACGCGCCC GCCAACACTT CCAGACAACC TCTGGATAAT CTGACCGCCT ATGTGCTGCG TGAAAATCCG AAATATAAAG TACTCACCAT TGGTATAGAA CCGGAAGCAA ACCGCAGCAT CGTATACCTG CTGGTAAAAG GGAAACCAAA GGAGATTAAA AATCAGCTGT ACGTAGCGGT GAACCCCTAC TCAGGTCAGA TCATTTCCTC CGTAGCGGGT AATAAACGCT TCTTCTCTGT CGTACTACAG TTACACCGTT ACCTCTGTAT GGGCGAAACC GGAAAGATTA TCACCGGTAT TTCCTGCTCC ATCTTTACCA TCCTGATCCT GACCGGTCTG ATATTATGGT GGCCTAAAAG GAACAACCGG AAACAGCGTT TCCGTGTGAA ATGGAATGCT TCTTTCAAAC GTCTGAACTG GGACATTCAT GCCGTATTCG GTTTTTATGT GCATATCATT CTCTTCGTGA TAGCTATTAC CGGACTGGTA TGGAGTTATA AATGGGCCAA TAGCCTGCTC TATCTCGCAT TTGATGGCAA CACCAAACAG CAGAAGATCG TAGCACCAAC CAGCAGAGCG GTAGAAAATA CAGGCATTGC TTACCTGGAC AGGATCGTAG CTACCACAAA CGAAAAGCTC CCTTACGAAG GAAAGATCAC CATCCGCTTT GCGGATTCAG ATACACTGGC CGTTTCTGCT GCAAAAGAAA ACAGATCCAG ACATGATAAT GTAAGCGATT TCCTGTACTT CGAAGCAGGT ACCGCCAAGC TGTTAAAAGT GAGACTGTAT GACAATGAAA GTGCAGGTAC AATTGCCAGA AGATGGGTCT ACCCGATCCA CACAGGCAGT CTGTATGGCG TTCCTACCAA GATTCTCGCG CTGATCGCTG CGCTGGTAGC ATTCACCCTG CCAATATCCG GATTTCTGAT CTGGATGGGG AGAAAGAAGA AGAAACCGAC AGCAAAAGCA AAGAAGAAAT TACCGATAAA TAAAACTGTC AACTCCAGGG TACAGATACA ATCATGA
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Protein sequence | MKKIFGWLHL WLGIGSGLVV LVVAGTGSLL VFEEELEHAF RSSFFYVDAP ANTSRQPLDN LTAYVLRENP KYKVLTIGIE PEANRSIVYL LVKGKPKEIK NQLYVAVNPY SGQIISSVAG NKRFFSVVLQ LHRYLCMGET GKIITGISCS IFTILILTGL ILWWPKRNNR KQRFRVKWNA SFKRLNWDIH AVFGFYVHII LFVIAITGLV WSYKWANSLL YLAFDGNTKQ QKIVAPTSRA VENTGIAYLD RIVATTNEKL PYEGKITIRF ADSDTLAVSA AKENRSRHDN VSDFLYFEAG TAKLLKVRLY DNESAGTIAR RWVYPIHTGS LYGVPTKILA LIAALVAFTL PISGFLIWMG RKKKKPTAKA KKKLPINKTV NSRVQIQS
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