Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0199 |
Symbol | |
ID | 8356299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 247243 |
End bp | 248457 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962342 |
Product | protein of unknown function DUF1501 |
Protein accession | YP_003119901 |
Protein GI | 256419248 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCT TAAACAGAAG ACGTTTCTTA CAGGTGGGAT CATTGGCCTC TGCTTCTATG ATGATGCCTA AATTCCTGAA AGCACTGGAA AAAGATAACC TGGTGCCTCC CGGCAATAAA GTATTGGTCG TTGTACAATT ATCTGGCGGT AACGACGGAC TGAATACTGT TATCCCTTAT CGGAATGATA TTTATTACCG TTCACGTCCG ACCCTGGGTA TTCAACGTGA ACAGGCTTTA TCTCTGACGG ATGAAATAGG GATTCATCCT GCATTACATG GATTGAAAGG ATTGTATGAT GAAGGAGCGC TTGCTATATT GAATAACGTG GGTTATCCTA ACCCCGATCG CTCGCATTTC CGTTCGATGG ATATCTGGCA GTCTGCAAGC GCCTCATCTG AAAACTGGAC AGATGGCTGG ATCGGCCGTT TCCTGGATGC CCAGTGCCAG GGTTGTGATA AGCCTGTACA GGCACTGGAA ATAGATGATA CGCTGAGTCT GGCGATGAAA GGTGATCTGC AGAAAGGGCT TGCTTTCAAA GATCCCGATA AGTTACAGGC AGCCGCGAAT GACCGGATGT TTAAAGAGCT GTTGGGGAAG GAAAATGGCG GTCATCCGGT TGAAGATGAT CATGCACCGG TAGACTATCT GTATAAAACA ATGGGTGCAA CTATGTCATC CGCAGGATAT ATTAAAAATC AGTTCAAGGC GTATAAAACC AAAGAGCTTT TCCCGGCGAC AGACCTGGGG AAAAACATGC AGACCATTGC CCGTCTGATC ATGTCAGATA TCAGTACGAA AGTATATTAT GTGTCGCATG GCGCTTTTGA CACACATGTG AATCAGCTGG CTTCGCAGCA GACGCAGTTG AAAAGACTGG ATGAAGCCAT TACAGCGCTG ACCCGTGAAC TGAAGAATAA CAACCGTTTC CAGGATGTAG TGATTGTGAC CTTCTCTGAA TTCGGCCGTC GCGTAGCACA GAATGCCAGT GGAGGAACAG ATCATGGCAC CGCCAATAAT ATGTTCCTGA TTGGCGGCGG ACTGAAAAAA CAGGGATTGC TGAATGATGG ACCTGACCTG GTCAATCTGA ATGAAGGCGA CCTTCAACAC ACGGTCGATT TCAAGCGTGT GTATGCTACA TTATTGAAAA ACTGGTTGGG CGCAGATGAT GCGGCTATTC TGAAAAAGCA GTACGAACAT TTATCCTTTG TTTAA
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Protein sequence | MLILNRRRFL QVGSLASASM MMPKFLKALE KDNLVPPGNK VLVVVQLSGG NDGLNTVIPY RNDIYYRSRP TLGIQREQAL SLTDEIGIHP ALHGLKGLYD EGALAILNNV GYPNPDRSHF RSMDIWQSAS ASSENWTDGW IGRFLDAQCQ GCDKPVQALE IDDTLSLAMK GDLQKGLAFK DPDKLQAAAN DRMFKELLGK ENGGHPVEDD HAPVDYLYKT MGATMSSAGY IKNQFKAYKT KELFPATDLG KNMQTIARLI MSDISTKVYY VSHGAFDTHV NQLASQQTQL KRLDEAITAL TRELKNNNRF QDVVIVTFSE FGRRVAQNAS GGTDHGTANN MFLIGGGLKK QGLLNDGPDL VNLNEGDLQH TVDFKRVYAT LLKNWLGADD AAILKKQYEH LSFV
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