Gene Cpin_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0199 
Symbol 
ID8356299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp247243 
End bp248457 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID644962342 
Productprotein of unknown function DUF1501 
Protein accessionYP_003119901 
Protein GI256419248 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT TAAACAGAAG ACGTTTCTTA CAGGTGGGAT CATTGGCCTC TGCTTCTATG 
ATGATGCCTA AATTCCTGAA AGCACTGGAA AAAGATAACC TGGTGCCTCC CGGCAATAAA
GTATTGGTCG TTGTACAATT ATCTGGCGGT AACGACGGAC TGAATACTGT TATCCCTTAT
CGGAATGATA TTTATTACCG TTCACGTCCG ACCCTGGGTA TTCAACGTGA ACAGGCTTTA
TCTCTGACGG ATGAAATAGG GATTCATCCT GCATTACATG GATTGAAAGG ATTGTATGAT
GAAGGAGCGC TTGCTATATT GAATAACGTG GGTTATCCTA ACCCCGATCG CTCGCATTTC
CGTTCGATGG ATATCTGGCA GTCTGCAAGC GCCTCATCTG AAAACTGGAC AGATGGCTGG
ATCGGCCGTT TCCTGGATGC CCAGTGCCAG GGTTGTGATA AGCCTGTACA GGCACTGGAA
ATAGATGATA CGCTGAGTCT GGCGATGAAA GGTGATCTGC AGAAAGGGCT TGCTTTCAAA
GATCCCGATA AGTTACAGGC AGCCGCGAAT GACCGGATGT TTAAAGAGCT GTTGGGGAAG
GAAAATGGCG GTCATCCGGT TGAAGATGAT CATGCACCGG TAGACTATCT GTATAAAACA
ATGGGTGCAA CTATGTCATC CGCAGGATAT ATTAAAAATC AGTTCAAGGC GTATAAAACC
AAAGAGCTTT TCCCGGCGAC AGACCTGGGG AAAAACATGC AGACCATTGC CCGTCTGATC
ATGTCAGATA TCAGTACGAA AGTATATTAT GTGTCGCATG GCGCTTTTGA CACACATGTG
AATCAGCTGG CTTCGCAGCA GACGCAGTTG AAAAGACTGG ATGAAGCCAT TACAGCGCTG
ACCCGTGAAC TGAAGAATAA CAACCGTTTC CAGGATGTAG TGATTGTGAC CTTCTCTGAA
TTCGGCCGTC GCGTAGCACA GAATGCCAGT GGAGGAACAG ATCATGGCAC CGCCAATAAT
ATGTTCCTGA TTGGCGGCGG ACTGAAAAAA CAGGGATTGC TGAATGATGG ACCTGACCTG
GTCAATCTGA ATGAAGGCGA CCTTCAACAC ACGGTCGATT TCAAGCGTGT GTATGCTACA
TTATTGAAAA ACTGGTTGGG CGCAGATGAT GCGGCTATTC TGAAAAAGCA GTACGAACAT
TTATCCTTTG TTTAA
 
Protein sequence
MLILNRRRFL QVGSLASASM MMPKFLKALE KDNLVPPGNK VLVVVQLSGG NDGLNTVIPY 
RNDIYYRSRP TLGIQREQAL SLTDEIGIHP ALHGLKGLYD EGALAILNNV GYPNPDRSHF
RSMDIWQSAS ASSENWTDGW IGRFLDAQCQ GCDKPVQALE IDDTLSLAMK GDLQKGLAFK
DPDKLQAAAN DRMFKELLGK ENGGHPVEDD HAPVDYLYKT MGATMSSAGY IKNQFKAYKT
KELFPATDLG KNMQTIARLI MSDISTKVYY VSHGAFDTHV NQLASQQTQL KRLDEAITAL
TRELKNNNRF QDVVIVTFSE FGRRVAQNAS GGTDHGTANN MFLIGGGLKK QGLLNDGPDL
VNLNEGDLQH TVDFKRVYAT LLKNWLGADD AAILKKQYEH LSFV