Gene Cpin_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0195 
Symbol 
ID8356295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp241203 
End bp242480 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content49% 
IMG OID644962338 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_003119897 
Protein GI256419244 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT TACTATTAGG AAGCGGCGGT CGCGAACACG CCCTGGCTTG GAAAATGGCA 
CAGAGCACAC ATTGTGAACA GTTGTTTATA GCGCCCGGCA ATGCGGGTAC TGCCCAGTAT
GGTCAGAACC TGGATTTCGC TGTTTCTGAT TTTGAGAAAA TAAAGACATT CTGCGTAGAG
AATGCAATCT CGCTGGTAGT GCCAGGTTCT GAAGAAGCAC TGGTAAAAGG AATTTACGAT
TATTTTCAGC AGGACGCTGC TTTACGGCAT ATCCCGGTAA TGGGCCCCTC TGCCCTGGGT
GCACAACTGG AGGGTAGTAA AGCATTTGCG AAACAGTTCA TGCTGCGTCA TGATATTCCG
ACTGCCGCTT ACCGCGAGTT CAGTGAGGAA AATTATGAGG AAGGTGTGGC TTACCTGCGT
ACGCATTCCC TCCCGATCGT ACTGAAAGCC GATGGACTTG CGGCGGGAAA GGGTGTATTG
ATCCTGAACG ATCATGAAGA AGCAGTGGCG GAGTTTTCAC AGATGATCAA AGATGCGAAG
TTTGGCGATG CGAGCAAGAA AGTAGTGGTA GAACAGTTTT TGACGGGAAT CGAGTTGTCA
GTATTTGTGC TGACAGACGG TCATTCTTAC CAGATACTGC CTACTGCAAA AGATTATAAA
AGGATCGGAG AAGGAGATAC AGGTCTGAAT ACCGGAGGTA TGGGGGCTGT TTCACCGGTG
CCGTTTGCCG ATAAGGCATT TATGGACATG GTGGAAGAGC GTGTTATCCG TCCGACGGTG
GCCGGTCTGG AAAAAGAGCA GATCGCCTAT AACGGGTTTA TCTTCTTCGG TTTGATCAAG
GTAGATGGGG AACCATTTGT CATTGAGTAC AACTGTCGTA TGGGGGATCC GGAAACAGAA
GTGGTGATGC CACGACTGCA GAACGATCTG CTGGAACTTT TCAAGGCGGT GGAGGAAGGG
AAACTTTCTT CACAGCAGAT TTTTGAGGAT GCCCGTGTGG CAACTACGGT TATGCTGGTA
GCAAAAGGCT ATCCCGAGGC ATACGAAAAA GGAAAGGTAA TCAGCAACAT ACCGGCGCCT
ACGCAGGATC AGCTGGTGTT TCAGGCAGGA ACACGTGCCG CTGGCGGAGA AATTCTGACC
AACGGAGGGC GTGTACTGAC GATAACATCC CTTGCAGCAG ATCTGGGCAT TGCGTTGACA
CACAGCCGGC AGACAGCTGA AATTATTGAC TTTGAAGGCA AATATTACAG GAGGGATATT
GGTTACGAGT TCGTGTAG
 
Protein sequence
MKILLLGSGG REHALAWKMA QSTHCEQLFI APGNAGTAQY GQNLDFAVSD FEKIKTFCVE 
NAISLVVPGS EEALVKGIYD YFQQDAALRH IPVMGPSALG AQLEGSKAFA KQFMLRHDIP
TAAYREFSEE NYEEGVAYLR THSLPIVLKA DGLAAGKGVL ILNDHEEAVA EFSQMIKDAK
FGDASKKVVV EQFLTGIELS VFVLTDGHSY QILPTAKDYK RIGEGDTGLN TGGMGAVSPV
PFADKAFMDM VEERVIRPTV AGLEKEQIAY NGFIFFGLIK VDGEPFVIEY NCRMGDPETE
VVMPRLQNDL LELFKAVEEG KLSSQQIFED ARVATTVMLV AKGYPEAYEK GKVISNIPAP
TQDQLVFQAG TRAAGGEILT NGGRVLTITS LAADLGIALT HSRQTAEIID FEGKYYRRDI
GYEFV