Gene Cpin_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0178 
Symbol 
ID8356278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp224607 
End bp225443 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content44% 
IMG OID644962321 
Productmetallophosphoesterase 
Protein accessionYP_003119880 
Protein GI256419227 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA AGCGCCCTCT CGATATTGTA GTTATATCTG ATGTTCATCT TGGCATCTAC 
GGCTGTCATG CGAAAGAATT AGTCCAGTAC CTCGACAGTA TCGATCCTAA GATATTGGTA
CTGAATGGGG ATATCATCGA TATCTGGCAG TTCAGCAAGC GTTATTTCCC TAAAGCCCAT
ACCAAAGTGA TCCGTCGCAT TCTGAAAATG ACCGGAAAGG GGACTGAAGT ATACTATCTG
ACAGGAAATC ATGACGAAGC ACTCCGCAAA TTTGCCGGTT TCGGACTGGG TAATCTGACC
ATCGATAACA AGCTGATCCT GGAAGTAGAC GGGAAAAGAC ACTGGTTTTT CCATGGAGAC
GTGTATGACG TGACCATGAA AAACTCAAAA TGGCTGGCTA AACTGGGTGG AAAGGGGTAT
GATCTGCTGA TTATTATCAA CAGGTTGGTT AATAATATTT TAGAGCGAAT GGGGAAGGAA
AAGATGAGCT TTTCCAAAAA GGTGAAACAT GGTGTGAAAC AAGCTGTTAA GTTTATTTCA
GATTTTGAGC AGGTGGTAGC TGAAATTGCT GTTGATAAGG GATTTGATGT GGTATGCTGC
GGGCATATAC ACCAGCCGAT TATCAAAGAA ATGCAGCATA ATGGTAAGAA CGTGACCTAT
CTTAATTCCG GCGACTGGGT GGAAAGTCTC ACCTCGCTGG AATATACCAG TGGTCAATGG
AGTCTCTATC AGTATCCCGT ATCAAAAGCG CGTGTTGTAT TACCAGAAGA GGAAGAAGAT
GGCTCAGCCA TGCCCTGGGA AGACATTTCC AAGGTCATCA GCTTCCCGCA ACAATAA
 
Protein sequence
MSDKRPLDIV VISDVHLGIY GCHAKELVQY LDSIDPKILV LNGDIIDIWQ FSKRYFPKAH 
TKVIRRILKM TGKGTEVYYL TGNHDEALRK FAGFGLGNLT IDNKLILEVD GKRHWFFHGD
VYDVTMKNSK WLAKLGGKGY DLLIIINRLV NNILERMGKE KMSFSKKVKH GVKQAVKFIS
DFEQVVAEIA VDKGFDVVCC GHIHQPIIKE MQHNGKNVTY LNSGDWVESL TSLEYTSGQW
SLYQYPVSKA RVVLPEEEED GSAMPWEDIS KVISFPQQ