Gene Cpin_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0174 
Symbol 
ID8356274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp217975 
End bp219120 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID644962317 
Producthypothetical protein 
Protein accessionYP_003119876 
Protein GI256419223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC GTATTGCCTC TTTAGCAGTT ACCATTACTG CGATGTCTGC TTTTTTATTT 
GCCTGTAAAA AAGAGGATGC ACAAACCCGC AGCCAAGTCC TGGTGAACCA TGAAATTCAA
GCGCGTGTAG ATGAAAAGTA TCTGCAGAAG ATCCATGATC TCGGATTTGA TACATCCGGC
GTAAAAAATT ATGATTCAAT TTTTGTAGTA GAAGGAGATC GTGCTATTTC AAGAAAATTT
CTGGATGAAT ACAACGTCAG AAAGGATGCA AATGCAAAGT ACGCAACCGC TACTAATCTC
TGGACACTCG GTACACAGAT CAAAGTGTTT TTACCGTCAA CTGTCCTTGG AGAATCCCGT
TATTATAACG GCGCTGTAAA AGCGATCCAG GAATGGAACA GTGCACATTC TGCCCTGAGC
TTTTATGCTA CCTACTATGC AACTGATCCG GCATACAGTT TCCAGATCGT TTATGGTACC
CTGCCTTCAG GTGTGTATGC AATGGGAGAT TATCCAGGAT TTTCTAACTT CAATGGTGTG
AACGGTTATC AGATCATCCT GAACAAAACC CTGATCGATT CACAGAATCT TAGCGCTGAC
CAGATCGCCT GGCTGATCGC ACACGAAATC GGTCACATGA TGGGACTGCG TCACAGCGAC
TGGAATACAC AAGGTGAAGG TGTTGCTGAC AATGGTCAGG TGATCGGTAA CGTCGATCTG
CCTGCTTTTA CCGAAGCTGA TGCTGCCGGT TCAATCATGC GTAAGAACTT CGTACCTTCT
ACTAATGACG GATTTATACT GTTTAATGAA AGCGGTAAAG ATGCTGAAGT AATCAGAGCA
TTATACCCAG GTTCTGCATG TAACCTTTAT CCTCACATCA ACCTGCCGGC ATCTGGTACA
CAGGCTACCT ATAACAACAT TGGTACGCTG TATCCTTCTT ACAGAGTAAA ACTGTCTGAA
CTGATTGCTG TAGAGTGGGA TATCAAAAAC AGCGCTAATG TAAGCGTGGC TACATGGAAC
GATTCTGACA TATCTTTCCA TTTCCCTTCC AATCTGCCAA AAGGTACATA CAATGTGTTC
CACAGGGTAA GGACGACTAC CTGTCCTAAT GGTACTCAGA TTGTAAAACT GATCCAGATT
TTATAA
 
Protein sequence
MRTRIASLAV TITAMSAFLF ACKKEDAQTR SQVLVNHEIQ ARVDEKYLQK IHDLGFDTSG 
VKNYDSIFVV EGDRAISRKF LDEYNVRKDA NAKYATATNL WTLGTQIKVF LPSTVLGESR
YYNGAVKAIQ EWNSAHSALS FYATYYATDP AYSFQIVYGT LPSGVYAMGD YPGFSNFNGV
NGYQIILNKT LIDSQNLSAD QIAWLIAHEI GHMMGLRHSD WNTQGEGVAD NGQVIGNVDL
PAFTEADAAG SIMRKNFVPS TNDGFILFNE SGKDAEVIRA LYPGSACNLY PHINLPASGT
QATYNNIGTL YPSYRVKLSE LIAVEWDIKN SANVSVATWN DSDISFHFPS NLPKGTYNVF
HRVRTTTCPN GTQIVKLIQI L