| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0164 |
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| Symbol | |
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| ID | 8356264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 202942 |
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| End bp | 205335 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962307 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_003119866 |
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| Protein GI | 256419213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCT GGTTCCGAAA ACGTAAATGG TGGCTCATTG CCGCAACACT ACTCCTTATA
CTCTACATCT TTTGTATCCC TTCCCGTCTT TTCACCACAC CGACCTCATT TGTAATTGAA
GACAGTAACG GCGAATTACT AAGCGCAACC ATCGCTACAG ACGGGCAATG GCGATTCCCG
GCTGACAAAC GGGTACCTGA AAAATTTGCT GCCTGTATTG TAGCGTATGA AGACAAACGC
TTCTATCATC ACTGGGGCGT AGATCTACTG GCATTGGGAC GTGCGATCAG ACAGAACCTC
AGCAGTAAAA AGGTAGTGAG TGGCGGTAGT ACGCTCACCA TGCAGGTGAT ACGCCTCTCC
CGCAATAAAG AGCGTAATAT CTTTCAGAAG CTGATTGAAG CGGTGATGGC AACCAGGATG
GAGTTTTCCT ATTCCAAAAA AAGTATTCTC TCCTTATACG CAGGTAATGC ACCTTTCGGC
GGAAACGTCG TAGGACTGGA AGCTGCTTCC TGGCGATACT ATGGTCGTAG TGCGACACAA
TTGTCATGGG GGGAAACGGC GGCGTTGGCG GTATTGCCCA ATAGTCCGGC CCTGGTACAC
CCCGGTCGTA ACCGGCAGAT CTTATTACGC AAAAGGAATC AGTTACTGGA AAGGTTATGG
CATAATGAAA CCATTGATAG TGTAACCTGT CAGCTGGCTG AACTGGAACC ATTACCCGAT
CAGCCCAAAG CATTGCCACA GGATGCACCT CATCTGCTGG ATCGTTTCCG CAGAGATTAT
CCTGCACAAA AAACCAGGGA CGAAAAAGCC GTAACACGTA TCCAGACTAC ATTAGATGCC
GCACTTCAGC GGAATGTCAG CAATATCGTA GAACGATATC ATGCTGTTTA TAAAGCCAAT
GGCATCAACA ATGCAGCCGC GGTTGTACTG GATGTGGAAA CCGGTGATGC ATTAGCCTAT
GTAGGAAATA TTTATCATCC CGAAGATCCG GAGACGGAAA GCCATGTTGA TATTATACAG
GCGCCCCGTA GTCCGGGTAG TACACTGAAA CCGATTCTGT ATGCGGCCAT GCTCACGGAT
GGGATTATAC TACCGCATTC ACTGGTACCG GATATTCCTA CACAGATAGC CGGATATACA
CCACAGAACT TTGACCTGGG TTATGACGGC GCTGTACCTG CCAGTAAGGC ACTGGCTCGT
TCATTAAACA TACCGGCAGT CAGAATGCTG CAACAATACA GGTATGAAAG AATGCACGCA
TTGCTAAAGA AACTGGGTAT TACAACATTA AATCAACCAC CTGACCACTA TGGTCTGTCA
CTGATATTAG GCGGAGGGGA ATCTACCCTC TGGGAAATGA CAGGTATGTA TGCCAGTCTG
GCCCGCACAC TGCTGCATCT TGAGCAATAC AATGGCAAGT ATGACGCAGA CGACATCCAT
GCACCGAACT ATCGTAAAGA TGCTAAACGG GTGTCAAAAT TTGCCCCTTC TGCCACAGGC
GTATTAGATG CAGGCGCGAT CTGGTATACC TTTCAGGCAA TGGAAGAGGT AATGCGGCCG
GGAGAGGAGA TGTTATGGCA ACAATTCTCC TCCTCACAGC GTATTGCATG GAAAACAGGT
ACCAGTTTTG GTTTCAGGGA TGGATGGGCA ATCGGTGTGA CGCCACAATA CATTGTCGGT
GTATGGGTGG GCAATGCCGA TGGAGAAGGA AGACCAGGGC TGGTTGGTGT GTCTACTGCT
GCACCGATTA TGTTTGATGT ATTCAGACTC CTCCATACAG GTAGCTGGTT CAATACTCCA
TACGATAAGC TGCGGAAGAT TGAAGTATGC CGGCAAAGCG GTTACAGGGC CAGCGATCTT
TGTCCGGAGA AAGATTCTAT CGCCGTTCCT GCCAACGGTC TTCGTTCAGG ACTCTGTCCT
TATCATCAGC TGGTGCACCT GGATCATAGC GGTCAATTGC GCGTGACAGC CGACTGTGAA
TCCCCTTCCC AGATGCAGCA TGTACCCTGG TTTATATTAC CGCCTGCCAT GGAATTTTAC
TATCGCACCA AACATAATTA TCTGCCTTTA CCCCCTTATA AACAGGAATG TCTGGCTACC
CTCAGTCAGG ATAAAGCACC GATGGAGGTG ATCTATCCGA GACCCAATGC GCGTATTTAT
GTACCAATAG AGATAGATGG TAAGCCGGGA GAGGCCGTAT TTACAGCTAC ACACCGCAAT
ACGGCAGAAA AGATCTTCTG GCATATGGAT GACAGCTACC TGGGAACGAC GCAGGAATTC
CATCAGATGG CTTTACATCC ACCAGCAGGT AAACACACCC TTACACTCGT AGATGAGCAG
GGCGTGCAGA TACATGTGCC ATTTGAGATA CTGGAGAAAA AAGGTGAAGA CTAA
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| Protein sequence | MSPWFRKRKW WLIAATLLLI LYIFCIPSRL FTTPTSFVIE DSNGELLSAT IATDGQWRFP
ADKRVPEKFA ACIVAYEDKR FYHHWGVDLL ALGRAIRQNL SSKKVVSGGS TLTMQVIRLS
RNKERNIFQK LIEAVMATRM EFSYSKKSIL SLYAGNAPFG GNVVGLEAAS WRYYGRSATQ
LSWGETAALA VLPNSPALVH PGRNRQILLR KRNQLLERLW HNETIDSVTC QLAELEPLPD
QPKALPQDAP HLLDRFRRDY PAQKTRDEKA VTRIQTTLDA ALQRNVSNIV ERYHAVYKAN
GINNAAAVVL DVETGDALAY VGNIYHPEDP ETESHVDIIQ APRSPGSTLK PILYAAMLTD
GIILPHSLVP DIPTQIAGYT PQNFDLGYDG AVPASKALAR SLNIPAVRML QQYRYERMHA
LLKKLGITTL NQPPDHYGLS LILGGGESTL WEMTGMYASL ARTLLHLEQY NGKYDADDIH
APNYRKDAKR VSKFAPSATG VLDAGAIWYT FQAMEEVMRP GEEMLWQQFS SSQRIAWKTG
TSFGFRDGWA IGVTPQYIVG VWVGNADGEG RPGLVGVSTA APIMFDVFRL LHTGSWFNTP
YDKLRKIEVC RQSGYRASDL CPEKDSIAVP ANGLRSGLCP YHQLVHLDHS GQLRVTADCE
SPSQMQHVPW FILPPAMEFY YRTKHNYLPL PPYKQECLAT LSQDKAPMEV IYPRPNARIY
VPIEIDGKPG EAVFTATHRN TAEKIFWHMD DSYLGTTQEF HQMALHPPAG KHTLTLVDEQ
GVQIHVPFEI LEKKGED
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