Gene Cpin_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0161 
Symbol 
ID8356261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp195012 
End bp195470 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content47% 
IMG OID644962304 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003119863 
Protein GI256419210 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0647025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGT GGACCATTAA GACATTTGAG GAGCTGACCA CACAGGAGCT GTATGCCCTG 
TTGCGGCTGC GTAGTGAAGT GTTTGTTGTA GAGCAGAACT GCGTTTTTCA GGACATGGAT
AATGCAGATC AGCTGGCATT GCATATTCTG GGATATGACG ATACACTGAA CAATGAACTG
GTGGCCTATA CACGCATTTT CGGCCCTGGT ATTAAATTCG ATATGTGCTC AATCGGGCGG
GTAGTAACTT CTTCCCGTGC CAGGGGCAAT GGTACCGGCA GAAAGCTGAT GGAACATTCC
ATTGCAACTG TGGAAGATCG TTTTGGGAAA GTGCCTATCA AAATAGGGGC GCAACAGTAC
CTGGATAAGT TTTACAGTTC ATTGGGCTTT CAGCAGAGCA GTGAAATGTA CCTGGAGGAT
GATATTCCGC ACATCGAGAT GATCAGGGAA GCGAATTAG
 
Protein sequence
MIKWTIKTFE ELTTQELYAL LRLRSEVFVV EQNCVFQDMD NADQLALHIL GYDDTLNNEL 
VAYTRIFGPG IKFDMCSIGR VVTSSRARGN GTGRKLMEHS IATVEDRFGK VPIKIGAQQY
LDKFYSSLGF QQSSEMYLED DIPHIEMIRE AN