Gene Cpin_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0157 
Symbol 
ID8356257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp188979 
End bp190241 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content49% 
IMG OID644962300 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003119859 
Protein GI256419206 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTG TTACGTTAAA AAGGGTTGTG GTTACCGGGC TGGGGGCCTT AACGCCTATC 
GGAAACGATG TAAACACATT CTGGAATAGT CTGAAATCTG GTACCGGTGG TGCTGGTCCT
ATTACCCGTT TTGATACTAC GGAGTTTAAA ACTAAGTTCG CTTGCGAGCT GAAAGGTTTT
GATATAGAAA AGTTCATGGA GAAGAAAGAA GCCCGCAAAA TGGACATGTT TACACAATAT
GCCATGGTTG CTGCTCAGGA AGCTGTTGAA AATGCAGGCC TTCACCTGGA CGGTGTTGAT
AAAACCCAAA TCGGTGTGAT CTGGGCTTCT GGTAACGGCG GTATGCAGAC CTTCGAAGAC
CAGATCGTAG AATTTACACA GACCAATTTC GTTCCTAAAT TCAATCCTTT CTTTATTCCA
AAACTGATCT CCGACATCGC GGCTGGTCAG ATTTCTATGA AATATGGATT CATGGGCGTA
AACTATTGTA CGGTATCTGC CTGCGCTTCC TCCAGCAGCG CCCTGGTAGA CGCGTTCAAC
TATATTCGCC TCGGTAAAGC TAACGCTATC GTAGCCGGTG GTTCTGAAGC TCCTGTAACC
CGCGCTGGTA TCGCAGGTTT CAATGCCCTG AAAGCCCTGT CTACCCGTAA CGATGATCAT
GCTACCGCTT CCCGTCCTTT CGACGCTGAC CGTGACGGTT TCGTAATGGG CGAAGGTGCT
GGCGCCATCA TACTGGAAGA ATATGAACAC GCAGTAAAAA GAGGCGCTAC CATCTACGCT
GAAATGGTAG GTGGCGCTAT GACCGCTGAT GCTTACCACC TGACCGCTAC CCACCCTGAA
GGGCTGGGCG CGCGCCTCGG TATGGAGAGA GCACTCGAAG ACGCTGAACT GACACCTGAA
GATGTTGATT ATATCAACGC ACACGCTACT TCCACCCCAC TGGGTGACGT TAGCGAACTG
AAAGGTATCA CCGGTGTATT CGGCGACCAT ATCACCAAAG TGAATATCTC CGCTACTAAA
TCCATGACAG GACACCTGTT AGGTGCTGCC GGTGCTATCG AAGCAATCGC TTGTATCAAA
GCGACTCAGT TCGATATCGT ACCACCAACC ATCAACACCG GTACCCTGGG CGAAGGCATC
CCGACCAACC TGAACCTGAC CATCGGTAAG GCACAGGAAC GTACCGTAAA TGTTGCTATG
AGCAATACTT TCGGCTTCGG CGGTCACAAT GCGATCGTAG TATTCAAGAA ATACAAAGCT
TAA
 
Protein sequence
MRTVTLKRVV VTGLGALTPI GNDVNTFWNS LKSGTGGAGP ITRFDTTEFK TKFACELKGF 
DIEKFMEKKE ARKMDMFTQY AMVAAQEAVE NAGLHLDGVD KTQIGVIWAS GNGGMQTFED
QIVEFTQTNF VPKFNPFFIP KLISDIAAGQ ISMKYGFMGV NYCTVSACAS SSSALVDAFN
YIRLGKANAI VAGGSEAPVT RAGIAGFNAL KALSTRNDDH ATASRPFDAD RDGFVMGEGA
GAIILEEYEH AVKRGATIYA EMVGGAMTAD AYHLTATHPE GLGARLGMER ALEDAELTPE
DVDYINAHAT STPLGDVSEL KGITGVFGDH ITKVNISATK SMTGHLLGAA GAIEAIACIK
ATQFDIVPPT INTGTLGEGI PTNLNLTIGK AQERTVNVAM SNTFGFGGHN AIVVFKKYKA