Gene Cpin_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0148 
Symbol 
ID8356247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp180138 
End bp181118 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content41% 
IMG OID644962291 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_003119851 
Protein GI256419198 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCT TAAAGCATAG CATTATAATA CTGGTAGCAG CATTGACATT AGGCTCAATA 
GAAAAAGCAT CTGCACAAAC AAAAGCTGGT ATTCTGGGAA TAGATCACAT CGGTGTCAAC
GTTCCGGATA TGTCACAGGC AGTCGCATTC TTTACCGATG TACTGGGCTT CACACCTGTT
ACGCAGATAG GACCCATACC ACTGAACGAT GCCTGGAAAA CAGCTAATCA CATGCAGTCA
GGTACAGGCG CCGTATCCAT CAAAATGGTA CATGCAGGTA GCGGCGCCAA TATTGAACTA
TTCTACTATG AAAATAATAA AGGTGCACAA CAACAACCAG GTGGTGATGA TGCCGGCGCT
ACTCACATCG CATTTTACAC CACAGATATT AATGCTGCGG TGGCCTACCT GAAATCAAAA
AATGTCAAAA TGCTGGGAGA ACCATTCCAC ACAACAATGG GCGACACTGC TGGTGAAACA
TGGGTGTACT TTGAAACACC ATGGGGCGCT AAAATGGAAT TGGTATCCTA TCCGGAAGGT
AAAGAATATG AAAAGAATCA TCCAAAAGAA TTACTGTGGT CACCTAAAAC AGCTGTTAAT
AACTTAAATA CAATTACTAT GGATACAAAA GATCTTCTCG CAATCGTTGA ACAACACCTG
CTGATATGGA ATGAAAAAGA TGCCGCTAAA CGCAGTGCAA TTGCTCAAAA GGTATATGCA
GCAGACATTG AAATGGTAGA CAGACACTTC ACTGCTACTG GTTATGACAG TATCAATGAG
TTTGTTAATA AACTACAGAA AGATAATCCA TCTGCCCGCT TTACACATGT AAAAGCAATC
AACGCACATC ATAATATTGC ACGCCTGTTC TGGCAATTCG GACCTAAAGA AAAACCAGAC
GCGGTAACAG GAATGGACCT GTTTGTAATT GAAAACGGTA AAGTACAGAA GCTGTATGTA
TTTGTTGATG AAGCTAAATA A
 
Protein sequence
MKGLKHSIII LVAALTLGSI EKASAQTKAG ILGIDHIGVN VPDMSQAVAF FTDVLGFTPV 
TQIGPIPLND AWKTANHMQS GTGAVSIKMV HAGSGANIEL FYYENNKGAQ QQPGGDDAGA
THIAFYTTDI NAAVAYLKSK NVKMLGEPFH TTMGDTAGET WVYFETPWGA KMELVSYPEG
KEYEKNHPKE LLWSPKTAVN NLNTITMDTK DLLAIVEQHL LIWNEKDAAK RSAIAQKVYA
ADIEMVDRHF TATGYDSINE FVNKLQKDNP SARFTHVKAI NAHHNIARLF WQFGPKEKPD
AVTGMDLFVI ENGKVQKLYV FVDEAK