Gene Cpin_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0141 
Symbol 
ID8356240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp173480 
End bp174271 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content49% 
IMG OID644962285 
ProductMOSC domain containing protein 
Protein accessionYP_003119845 
Protein GI256419192 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAAG TCAGCCAATT ATTCATCTAT CCTGTAAAAT CTCTCGGCGG CATCGCCCTG 
GAGAAAGCAG ATATTACAGA CCGTGGTTTC AGATATGACC GCCGCTGGAT GCTAATTGAT
GACCAGAACC GTTTCCTTAC ACAAAGGGAA CATCCGGTAA TGGCATTGTT TAAACTACAA
CTGGCAAACG AAGGGATCCT CGTCCACTTT AAAAGCGACG CGTTTACCGT CCCCTTTGAA
CCACTCACTA CCATCACCGA ACAGGTAACT GTCTGGGATG ATACCTGCAC CGCCACGATC
GTCAGTCCGG CAGCTGATCA ATGGTTTACT GAAAGAATGG GCTTTCCTGT CCGACTCGTA
TACATGCCCG ATAACAGCCA CCGAAAAGTA GAAGCAGCAT ACGCTAAGCA TGAAGAGATC
GTATCTTTTG CAGATGGTTA TCCCTTCCTG ATCATCGGAC AATCCTCTCT CGATGAACTG
AATGACCGCC TGGAAACGCC TGTTCCTATG GACCGCTTCC GGCCCAACAT CGTATTTATC
GGCGGCACTC CCTTCCAGGA AGATGAAATG CACCATTTCA AAATCGGGGA TATCAATTTC
TACGGCGTTA AACCCTGCGG ACGTTGTGTG ATGACCACCG TCGATCAACA AACAGCCATC
AAAGGTCAGG AACCGCTCCG TACACTCGCC CGTTACAGAA CACACAATAA AAAAGTCCTC
TTCGGACAAA ACCTCCTGCA TAATGGCCAG GGCGCCATTC ACACCGGCGA TATACTTCAC
CTCCAGCAAT AA
 
Protein sequence
MLQVSQLFIY PVKSLGGIAL EKADITDRGF RYDRRWMLID DQNRFLTQRE HPVMALFKLQ 
LANEGILVHF KSDAFTVPFE PLTTITEQVT VWDDTCTATI VSPAADQWFT ERMGFPVRLV
YMPDNSHRKV EAAYAKHEEI VSFADGYPFL IIGQSSLDEL NDRLETPVPM DRFRPNIVFI
GGTPFQEDEM HHFKIGDINF YGVKPCGRCV MTTVDQQTAI KGQEPLRTLA RYRTHNKKVL
FGQNLLHNGQ GAIHTGDILH LQQ